DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and CG17359

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster


Alignment Length:427 Identity:95/427 - (22%)
Similarity:144/427 - (33%) Gaps:131/427 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LKSTCRVC------------AKYASNKRSPKLFERSNTKMIDNIEALTGLRLENYGCLPDQICEC 61
            :...||||            ..|||:.|    .:.....:...:...:|..:.....:|..||..
  Fly     3 ISQMCRVCRDESDCLLDIYTEPYASSNR----VQEQEPVLATMLRECSGCSVHKEDGMPQFICVE 63

  Fly    62 CSMELASAVKLRERCIAAQR---ELLLGLTE--------------EQRQGISAFYRAAVMGEDIV 109
            |:..:.:|.:||.:|..:.:   :|.|.:.|              |.:..:|           ::
  Fly    64 CAEAVRNAYRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIGDNIEPQMPVS-----------VM 117

  Fly   110 QTVKTPDDDEVYATYQEIVLEEPKEEIDDTKVEYDNTYYEVAEGHAGEDDAASLIEEADYDSIMA 174
            :..|||:..|........|...|.|....:....||..:::|:               .|.....
  Fly   118 EAGKTPETSEPLLVELVQVKYMPPEPKPISSPLPDNNEHKLAQ---------------SYSPAKT 167

  Fly   175 EDEEQQQTLELDEDTELIVGDVNDAYVYDSDDEVAVLDNVLDDEYEHENIVVKKCSLPPKPKVRS 239
            ...:.::......|        ||::..||             |.|||:                
  Fly   168 PHNKSKRRARSYSD--------NDSWSPDS-------------ELEHED---------------- 195

  Fly   240 DD----ARRRGTGGVYICEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRK 300
            ||    |.:||                        :..|....:.|:||...|.....|:.|||.
  Fly   196 DDKIWNASKRG------------------------KPKRVPGPYRCKLCTQSFTQKQNLEIHMRI 236

  Fly   301 HTGERPFACKYCGRCFTDYTTRVKHERTHTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRC 365
            ||||||:.|..|.|.|........|.|.||.|||:.|..|.|.|.....|:.|...|:||:.::|
  Fly   237 HTGERPYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRTHTGEQPFKC 301

  Fly   366 ELCDKSFM----LPTHLSTHFRSGVHKRHLEKAEMKQ 398
            ..|.:||.    |..|:|.|.|.   ||.....|.|:
  Fly   302 SKCQQSFKQLNGLQKHMSAHTRG---KRRTSSQETKR 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 17/85 (20%)
C2H2 Zn finger 253..273 CDD:275368 0/19 (0%)
COG5048 276..>331 CDD:227381 21/54 (39%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
zf-H2C2_2 293..317 CDD:290200 13/23 (57%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
zf-H2C2_2 324..346 CDD:290200 11/21 (52%)
C2H2 Zn finger 337..357 CDD:275368 6/19 (32%)
zf-H2C2_2 350..372 CDD:290200 7/21 (33%)
C2H2 Zn finger 365..383 CDD:275368 8/21 (38%)
CG17359NP_648679.1 zf-AD 6..88 CDD:285071 17/85 (20%)
zf-C2H2 215..237 CDD:278523 8/21 (38%)
C2H2 Zn finger 217..237 CDD:275368 8/19 (42%)
zf-H2C2_2 229..254 CDD:290200 14/24 (58%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 11/24 (46%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 286..310 CDD:290200 9/23 (39%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
00.000

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