DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and D19A

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster


Alignment Length:600 Identity:113/600 - (18%)
Similarity:180/600 - (30%) Gaps:246/600 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKSALKHLKSTCRVCAKYASNKRSPKLFERSNTKMIDNIEA----LTGLRLENYGCLPDQICEC 61
            |::.....:.|.||:|..:..|..:..|:      ::..:..    .|.|.:|.....|..:|..
  Fly     1 MNEGRQYSIHSLCRICLNHLQNDAAYDLY------LVPGLSKKLCFCTSLSVEQNDGFPKNLCTL 59

  Fly    62 CSMELASAVKLRERCIAAQRELLLGLTEEQRQGISAFYRAAVMGEDIVQTVKTPDDDEVYATYQE 126
            |..:|......:::|:.:.::.                      :|:|.:       .|:|....
  Fly    60 CYTKLNELHDFQKQCVDSVQKF----------------------QDLVAS-------NVFACQSS 95

  Fly   127 IVLEEPKEEIDDTKV-EYDNTYYEVAEGH-----AGEDDAASLIEEADYDSIMAEDEEQQQTLE- 184
            ..:.:|...:.|... |.|:..|:....|     ..|:|...::|..|.:   ||:.|::..:| 
  Fly    96 FDVFDPNVAVQDYPAEEEDHVNYDPLLNHKMELIENEEDVFKMLEHVDKE---AEEVEKEAKVEE 157

  Fly   185 ----------LDEDTELIVGDVNDAYVYD-------SDDEVAVLDNV----------------LD 216
                      .|:|:.:..|:.||   :|       |||::.:...:                ||
  Fly   158 DDGGNVSVKMFDDDSSIESGNDND---HDLDFEPNSSDDDIPLAQRMRGPATGSGPQQDRFSNLD 219

  Fly   217 DEYEHENIVVKKCSLPP------------------------KPKVRSDDARRRGTGGVYICEQCG 257
            ..........||...||                        |||.:......|....:..|..|.
  Fly   220 KPKPRPRGRPKKIKPPPPEEEELSDSSSESDDSEDGTSRGDKPKRKRIPIEERHLHRIIDCHICH 284

  Fly   258 NHIKGRMAFELHCRRHRGDKQFGC--ELCQSRF-------------------------------- 288
            ...|..:.:|.|.:.|.....|.|  |.|:..|                                
  Fly   285 QKFKKAIRYEEHMKYHNDLLPFQCKVETCKKGFTTANGLRIHIDHAHTELSEVHACIAEGCGKTF 349

  Fly   289 ---------------------------CTTSE--------LKRHMRKHTGER-PFACKYCGR--- 314
                                       ||..:        ||:||.|||||. |:.|..||:   
  Fly   350 PRVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRCPTALKKHMYKHTGEELPYPCNICGKRFV 414

  Fly   315 ----------------------CFTDYTTRVK---HERTHTNE---------------------- 332
                                  |....|||.:   |..|||.|                      
  Fly   415 INSALRDHLMRHAGIKNHVCPYCGVGKTTRQEWNAHILTHTKEKKFKCRQCDHASHNKQALSNHV 479

  Fly   333 -------RPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFM----LPTHLSTHFRSGV 386
                   :.:.|..|||.|...:..|.|...|:||:...|::|.|.|:    |..||.||     
  Fly   480 KVVHEKRKDFACQYCGKTFGKSHACKVHERSHTGEKCCECKICGKIFLCEKSLTKHLKTH----- 539

  Fly   387 HKRHLEKAE-MKQVL 400
            .||.|..|| ::|.|
  Fly   540 EKRDLPPAEPLRQQL 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 13/74 (18%)
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
COG5048 276..>331 CDD:227381 27/152 (18%)
C2H2 Zn finger 281..301 CDD:275368 10/88 (11%)
zf-H2C2_2 293..317 CDD:290200 14/57 (25%)
C2H2 Zn finger 309..329 CDD:275368 8/47 (17%)
zf-H2C2_2 324..346 CDD:290200 10/53 (19%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
zf-H2C2_2 350..372 CDD:290200 8/21 (38%)
C2H2 Zn finger 365..383 CDD:275368 9/21 (43%)
D19ANP_477304.1 zf-AD 12..83 CDD:214871 13/98 (13%)
C2H2 Zn finger 343..362 CDD:275368 0/18 (0%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
zf-H2C2_2 389..414 CDD:290200 13/24 (54%)
C2H2 Zn finger 406..426 CDD:275368 3/19 (16%)
C2H2 Zn finger 434..454 CDD:275368 5/19 (26%)
C2H2 Zn finger 462..483 CDD:275368 0/20 (0%)
C2H2 Zn finger 491..511 CDD:275368 7/19 (37%)
C2H2 Zn finger 519..539 CDD:275368 7/19 (37%)
C2H2 Zn finger 652..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
zf-H2C2_2 694..718 CDD:290200
C2H2 Zn finger 709..729 CDD:275368
tolA_full 724..>814 CDD:274303
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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