DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and D19B

DIOPT Version :10

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster


Alignment Length:549 Identity:108/549 - (19%)
Similarity:190/549 - (34%) Gaps:183/549 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKSALKHLKSTCRVCAKYASNKRSPKLFERSNTKMIDNIEALTGLRLENYGCLPDQICECCSME 65
            |::.:...:.:.||.|.....:..:..||....  :...:...|.|.:|.....|..:|..|..:
  Fly     1 MNEESQYSIHTVCRTCLSTVDDSAAYDLFRVPG--LAKKLCVCTSLSVEQADGFPKNLCNVCFSK 63

  Fly    66 LASAVKLRERCIAAQRELLLGLTEEQRQGISAFYRAAVMGEDIVQT----VKTPDDDEVYATYQ- 125
            |......:::|:.:.::.      :.....:||  |.....|::.|    ...|.::|....:. 
  Fly    64 LNDLHDFQKQCVDSVQKF------QDLVASNAF--ACQTNFDVLDTSAAVADLPGEEEDNVHFDP 120

  Fly   126 ------EIV---------LEEPKEEIDDTKVEYDNTYYEVAEGHAGEDDAASLIEEADYDS---I 172
                  ||:         ||..::|:::.::|.:..:     |...:||:.....:.|.|:   |
  Fly   121 LLNSKIEIIENEEDVFKMLESVEKEVEEVEMEMEQPF-----GRVSQDDSFESGNDNDLDADFQI 180

  Fly   173 MAEDE------------------------EQQQTLELDEDTELIVGDVNDAYVYDSD-------- 205
            .::|:                        .::|..|.:|..|....|.:|....|..        
  Fly   181 SSDDDIPLAQRSRRGATRGSKAKGKPKSAAKRQEEESEESEETSSSDDSDGNPKDKPKRKRIPAT 245

  Fly   206 --DEVAVLD-NVLDDEYE-----------HENIVVKKCSLPPKPKVRSDDARRRG---------- 246
              |...::| ::...:::           |.:::..:|::         ::.|:|          
  Fly   246 ERDRHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTV---------ESCRKGFTTANGLRVH 301

  Fly   247 -------TGGVYIC--EQCGNHIKGRMAFELHCRR-HRGD---KQFGCELCQSRFCTTSELKRHM 298
                   |..::.|  |.|.......:....|.:| |:.|   :.|.|..|:..|...:.||:||
  Fly   302 VEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTPQRDFPCTECEKVFRCPTALKKHM 366

  Fly   299 RKHTGER-PFACKYCGR-------------------------CFTDYTTRV---KHERTHTNERP 334
            .|||||. ||||:.||:                         |....|||.   ||..|||.|:.
  Fly   367 YKHTGEELPFACEICGKRFPINSVLRDHLLRHAGIKNHVCPYCGVGKTTRQEWNKHILTHTKEKK 431

  Fly   335 Y-----------------------------VCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDK 370
            |                             .|..|||.|...:..|.|...|:||:...|::|.|
  Fly   432 YECRQCDHASHNKQALANHVKVVHEKRKDFACQYCGKTFGKSHACKIHERSHTGEKCCECKICGK 496

  Fly   371 SFM----LPTHLSTHFRSGVHKRHLEKAE 395
            .|:    |..||.||     .||.|.|.:
  Fly   497 VFLFEKGLTKHLKTH-----EKRDLPKTQ 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 13/70 (19%)
C2H2 Zn finger 253..273 CDD:275368 5/22 (23%)
COG5048 276..>331 CDD:227381 28/86 (33%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:463886 16/49 (33%)
C2H2 Zn finger 309..329 CDD:275368 9/47 (19%)
zf-H2C2_2 324..346 CDD:463886 12/50 (24%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
zf-H2C2_2 350..372 CDD:463886 8/21 (38%)
C2H2 Zn finger 365..383 CDD:275368 9/21 (43%)
D19BNP_477297.1 zf-AD 12..83 CDD:214871 13/78 (17%)
C2H2 Zn finger 255..275 CDD:275368 0/19 (0%)
SFP1 <266..365 CDD:227516 18/107 (17%)
C2H2 Zn finger 283..335 CDD:275368 8/60 (13%)
C2H2 Zn finger 318..338 CDD:275368 4/19 (21%)
COG5048 <347..512 CDD:227381 49/169 (29%)
C2H2 Zn finger 349..369 CDD:275368 7/19 (37%)
C2H2 Zn finger 378..398 CDD:275368 3/19 (16%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
C2H2 Zn finger 434..455 CDD:275368 0/20 (0%)
C2H2 Zn finger 463..483 CDD:275368 7/19 (37%)
C2H2 Zn finger 491..511 CDD:275368 7/19 (37%)
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:463886
C2H2 Zn finger 643..663 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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