DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and CG17568

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:510 Identity:104/510 - (20%)
Similarity:175/510 - (34%) Gaps:137/510 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 HLKSTCRVCAKYASNKRSPKLFERSNTKMIDNIEAL-------TGLRLENYGCLPDQICECCSME 65
            |..:.||:|||..::.........::....||:..:       ..::||:.  |...:|..|...
  Fly     6 HWLNWCRLCAKDDAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDE--LSSVLCTECYTL 68

  Fly    66 LASAVKLRERCIAAQREL-LLGLTE---EQRQGISAFYRAAVMGED----IVQTVKT--PDDDEV 120
            ::..:...|.....|... :|..||   :|...::|..:...:.:|    |::.:..  .:.|.|
  Fly    69 ISELIDFAEHVTKVQDIFEVLRRTETDGDQEMDVAALRQQFGLCDDDWTHIIKPIPALEMESDNV 133

  Fly   121 YATYQEIVLEEPKEEIDDTKVEYD-------------NTYYEV------------AEGHAGEDDA 160
            |....|::.:.|..|....::|..             |...|:            .|.:..:.|.
  Fly   134 YQKPAELLKDFPLAETSSQEMEISKRTTTTHLIQTKKNVEMEIPKQEFIDLGPILLEKNTSQLDM 198

  Fly   161 ASLIEEADYDSIMAEDEEQQQTLELDEDTELIVGDVNDAYV--YDSDDEVAVLDNVLDDEYEHEN 223
            ..:::|      :.::|..|..|:.......:..||....:  .:.||:...:|..|.|      
  Fly   199 EDVLDE------LPQEELSQPRLDSTTSPASMENDVKSEMLDSCEGDDDFLPVDGQLMD------ 251

  Fly   224 IVVKKCSLPPKPKVRSDDARRRGTGGVYICEQCGNHIKGRMAFELH----CRR------------ 272
             :|...:.|...:..:::..:||.   ..||:||...:.|.::|.|    |||            
  Fly   252 -LVAVATTPNTLESTAEEKAKRGR---MDCEKCGKVYRNRASYEKHLERECRRIERRVKVDKTTT 312

  Fly   273 ----------------------HRGDKQFGCELCQSRFCTTSELKRHMRKHTGERP--------- 306
                                  |:..|.:.|:.|..:..|.:.|..|...||..||         
  Fly   313 TCDICNKTLSSATALKLHKEGIHQNVKPYICDSCGKQLKTITALNEHKLVHTESRPFECTVCKAG 377

  Fly   307 ------------------FACKYCGRCFTDYTTRVKHERTHTNERPYVCGTCGKAFTTGYILKNH 353
                              |.|..||:......|...|:..||.||...|..||..|.....||.|
  Fly   378 FKNRARLKAHYQIHAEPSFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTLKTH 442

  Fly   354 MLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVHKRHLEKAEMKQVLEQEQKREL 408
            :|.|:|.|.|.|..|.|||.    .:.:.||...|:|      .|.::||....|
  Fly   443 LLSHTGLRPYVCNYCGKSFA----CNANCRSHKLKKH------PQEVQQEDGARL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 14/78 (18%)
C2H2 Zn finger 253..273 CDD:275368 10/57 (18%)
COG5048 276..>331 CDD:227381 17/81 (21%)
C2H2 Zn finger 281..301 CDD:275368 5/19 (26%)
zf-H2C2_2 293..317 CDD:290200 10/50 (20%)
C2H2 Zn finger 309..329 CDD:275368 5/19 (26%)
zf-H2C2_2 324..346 CDD:290200 9/21 (43%)
C2H2 Zn finger 337..357 CDD:275368 8/19 (42%)
zf-H2C2_2 350..372 CDD:290200 11/21 (52%)
C2H2 Zn finger 365..383 CDD:275368 5/17 (29%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 14/78 (18%)
COG5048 <313..471 CDD:227381 40/161 (25%)
C2H2 Zn finger 314..335 CDD:275368 0/20 (0%)
C2H2 Zn finger 343..363 CDD:275368 5/19 (26%)
C2H2 Zn finger 371..391 CDD:275368 0/19 (0%)
C2H2 Zn finger 398..418 CDD:275368 5/19 (26%)
C2H2 Zn finger 426..446 CDD:275368 8/19 (42%)
zf-H2C2_2 439..463 CDD:290200 13/27 (48%)
C2H2 Zn finger 454..475 CDD:275368 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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