DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and CG10959

DIOPT Version :10

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster


Alignment Length:380 Identity:88/380 - (23%)
Similarity:143/380 - (37%) Gaps:140/380 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 LGLTEEQRQGISA-------FYRAAVMGEDIVQTVKTPDDDEVYATYQEIVLEEP---------- 132
            |...|::.||:||       |.:..:..||:   :...:|.|     ||:.||:.          
  Fly    79 LAREEQEFQGVSAEPLAVDSFKKEYLPNEDV---LSEEEDAE-----QELGLEQDEGNPLRIMVL 135

  Fly   133 --KEEIDDTKV------EYDNTYYEVAEGHAGEDDAASLIEEADYDSIMAEDEEQQQTLELDEDT 189
              |:.:|:..:      ::|::...|.||.|.|    :|:           ..|..|..:.|||.
  Fly   136 GGKQSVDEETIDTMWQPDHDSSSASVNEGCALE----ALL-----------GVENPQDYQPDEDG 185

  Fly   190 ELIVGDVNDAYVYDSDDEVAVLDNVLDDEYEHENIVVKKCSLPPKPK-VRSDDARRRGTGGVYIC 253
            |                             ||:::..|:    .:|| .......||.|...|: 
  Fly   186 E-----------------------------EHQSVFKKQ----RQPKDYNCPHCDRRYTTQKYL- 216

  Fly   254 EQCGNHIKGRMAFE-----LHCR------------RHRGDKQFGCELCQSRFCTTSELKRHMRKH 301
               ..|:|....|.     :.|:            |.:...:|.|:||...|.::..|.||::.|
  Fly   217 ---NTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHTEFACQLCDKVFKSSRSLLRHVQGH 278

  Fly   302 TGERPFACKY--CGRCFTD-----------------------YTTR-----VKHERTHTNERPYV 336
            :|.|.|.|::  ||:.|.:                       |.:|     :.|.||||.|:|:.
  Fly   279 SGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQ 343

  Fly   337 CGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVHKRHL 391
            |.||.:.|.:..:|..|..:||.|:.|:|:.||.:|..|..|       .|.:||
  Fly   344 CQTCARRFASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKAL-------YHHKHL 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 4/36 (11%)
COG5048 276..>331 CDD:227381 22/84 (26%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:463886 10/25 (40%)
C2H2 Zn finger 309..329 CDD:275368 8/49 (16%)
zf-H2C2_2 324..346 CDD:463886 11/21 (52%)
C2H2 Zn finger 337..357 CDD:275368 6/19 (32%)
zf-H2C2_2 350..372 CDD:463886 9/21 (43%)
C2H2 Zn finger 365..383 CDD:275368 6/17 (35%)
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 2/20 (10%)
COG5048 <258..416 CDD:227381 43/141 (30%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
C2H2 Zn finger 289..308 CDD:275368 3/18 (17%)
C2H2 Zn finger 316..336 CDD:275368 4/19 (21%)
C2H2 Zn finger 344..364 CDD:275368 6/19 (32%)
C2H2 Zn finger 372..392 CDD:275368 9/27 (33%)
C2H2 Zn finger 400..420 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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