DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and Zfp280d

DIOPT Version :10

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001101635.2 Gene:Zfp280d / 315798 RGDID:1560796 Length:969 Species:Rattus norvegicus


Alignment Length:248 Identity:53/248 - (21%)
Similarity:93/248 - (37%) Gaps:41/248 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 DSIMAEDEEQQQTLELDEDTELIVGDVNDAYV--YDSDDEVAVLDNVLDDEYEHENIVVKKCSLP 232
            |::.:.:|.:    .||.:...::..|||.|.  |:.|        |.:::..|.......|...
  Rat   277 DNLNSANEAK----TLDSEKGKLIMLVNDFYYGKYEGD--------VQEEQKTHTTFKCFSCLKV 329

  Fly   233 PKPKVR--------------SDDARRRGTGGVYICEQCGNHIKGRMAFELHCRRHRGDKQFG--C 281
            .|..:|              |.::..:.|    .|:.|..........:.|........:|.  |
  Rat   330 LKNNIRFMNHMKHHLELEKQSSESWEKHT----TCQHCYRQFPTPFQLQCHIESTHTPHEFSTIC 390

  Fly   282 ELCQSRFCTTSELKRHMRKH--TGERPFACKYCGRCFTDYTTRVKHERT-HTNERPYVCGTCGKA 343
            ::|:..|.|...|.:||:.:  .||.|:.|:.|....:.::....|.|| |.|.:..:|..|.|.
  Rat   391 KICELSFETEQILLQHMKDNHKPGEMPYICQVCNYRSSLFSEVESHFRTSHENTKNLLCPFCLKV 455

  Fly   344 FTTGYILKNHMLIHSGERAYRCELCDKSFML----PTHLSTHFRSGVHKRHLE 392
            ........:|.:.|..:..:||..|...|:.    ..|.:.|.|:.|..:.||
  Rat   456 IKIATPYMHHYMKHQKKGIHRCTKCRLQFLTCKEKMDHKTQHHRTFVKPKQLE 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 3/19 (16%)
COG5048 276..>331 CDD:227381 17/59 (29%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:463886 8/25 (32%)
C2H2 Zn finger 309..329 CDD:275368 5/20 (25%)
zf-H2C2_2 324..346 CDD:463886 8/22 (36%)
C2H2 Zn finger 337..357 CDD:275368 4/19 (21%)
zf-H2C2_2 350..372 CDD:463886 5/21 (24%)
C2H2 Zn finger 365..383 CDD:275368 5/21 (24%)
Zfp280dNP_001101635.2 DUF4195 45..229 CDD:463993
C2H2 Zn finger 323..357 CDD:275371 4/33 (12%)
C2H2 Zn finger 360..381 CDD:275368 3/20 (15%)
C2H2 Zn finger 390..411 CDD:275368 7/20 (35%)
C2H2 Zn finger 420..439 CDD:275368 3/18 (17%)
Blue background indicates that the domain is not in the aligned region.

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