DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and Zfp819

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001014039.1 Gene:Zfp819 / 308561 RGDID:1309564 Length:614 Species:Rattus norvegicus


Alignment Length:290 Identity:81/290 - (27%)
Similarity:120/290 - (41%) Gaps:34/290 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 YQEIVLEEPKEEIDDTKVEYDNTYYEVAEGHA-GE-----DDAASLIEEAD---YDSIMAEDE-- 177
            :|....::|...:|..::........|...|: ||     :..|:::....   ...|:::||  
  Rat   212 HQSSATKQPNGVVDSCRLCTQGLSSAVCTTHSTGERACTGNQCANVLSPRSPLRQHGILSQDEPV 276

  Fly   178 ----------------EQQQTLELDEDTELIVGDVNDAYVYDSDDEVAVLDNVLDDEYEHENIVV 226
                            |||.|..||.:|..|......:::..|  |::.......:|..:|   .
  Rat   277 EYTKDEKAFTAGSASCEQQTTNTLDLETHFICHICGKSFLQKS--ELSFHPGTSREETRYE---C 336

  Fly   227 KKC--SLPPKPKVRSDDARRRGTGGVYICEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFC 289
            ..|  ||...|...............|.|..||.........::|.|.|.|::.:.|..|...|.
  Rat   337 PDCLKSLTTSPSSLQAHHEAHTKQKPYTCHDCGKSFSYASHLKVHLRIHTGERPYVCSDCGKAFS 401

  Fly   290 TTSELKRHMRKHTGERPFACKYCGRCFTDYTTRVKHERTHTNERPYVCGTCGKAFTTGYILKNHM 354
            ..|.|..|.|.||||:|:||.:||:.|...:...||.|.||.|:||.|..|||.|:....|..|.
  Rat   402 QKSVLTTHQRIHTGEKPYACSHCGKLFVYASDLRKHSRFHTGEKPYECRDCGKVFSNKSHLPVHR 466

  Fly   355 LIHSGERAYRCELCDKSFMLPTHLSTHFRS 384
            .||:||:.|:|..|.|||...:||..|.|:
  Rat   467 RIHTGEKPYKCRDCGKSFRRKSHLQVHGRT 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
COG5048 276..>331 CDD:227381 21/54 (39%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:290200 12/23 (52%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
zf-H2C2_2 324..346 CDD:290200 13/21 (62%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
zf-H2C2_2 350..372 CDD:290200 10/21 (48%)
C2H2 Zn finger 365..383 CDD:275368 8/17 (47%)
Zfp819NP_001014039.1 KRAB 27..81 CDD:214630
C2H2 Zn finger 336..357 CDD:275368 4/20 (20%)
COG5048 <346..538 CDD:227381 55/151 (36%)
C2H2 Zn finger 365..385 CDD:275368 5/19 (26%)
C2H2 Zn finger 393..413 CDD:275368 7/19 (37%)
C2H2 Zn finger 421..441 CDD:275368 7/19 (37%)
C2H2 Zn finger 449..469 CDD:275368 7/19 (37%)
C2H2 Zn finger 477..497 CDD:275368 9/20 (45%)
SFP1 <499..582 CDD:227516
C2H2 Zn finger 505..525 CDD:275368
C2H2 Zn finger 533..553 CDD:275368
C2H2 Zn finger 561..581 CDD:275368
zf-H2C2_2 573..598 CDD:404364
C2H2 Zn finger 589..609 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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