DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and Zfp12

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001276518.1 Gene:Zfp12 / 231866 MGIID:99157 Length:686 Species:Mus musculus


Alignment Length:379 Identity:101/379 - (26%)
Similarity:135/379 - (35%) Gaps:117/379 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LPDQICECCSMEL----------ASAVKLRER-CIAAQRELLLGLTEEQRQGISAFYRAAVMGED 107
            ||.  |..|...|          .|..|||.. |....:.|.....||...|..::..:....||
Mouse   131 LPQ--CNSCEKSLMCVSAFIRSDGSYAKLRPNVCAGCGKPLPCSKPEETHPGGESYEFSGDGDED 193

  Fly   108 IVQTVKTPDDDEVYATYQE-IVLEEPKEEIDDTKVEYDNTYYEVAEGHAGEDDAASLIEEADYDS 171
                   |..:|  ..||: ..||||.|.::..|.....|   |...|..|:..           
Mouse   194 -------PLGEE--GVYQKGHFLEEPFEYVECQKSFPKGT---VFLNHLEEEPC----------- 235

  Fly   172 IMAEDEEQQQTLELDEDTELIVGDVNDAYVYDSDDEVAVLDNVLDDEYEHENIVVKKCSLPPKPK 236
                                   |.|||       |||.|..  .|...|::.:::.     || 
Mouse   236 -----------------------DWNDA-------EVAFLQT--SDLSAHQDSLMEM-----KP- 262

  Fly   237 VRSDDARRRGTGGVYICEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRKH 301
                          |.|:|||.....:..|.:|.|.|.|:|.|.|..|...||....|..|.|.|
Mouse   263 --------------YECQQCGKSFCKKSKFVIHQRTHTGEKPFKCSQCGKSFCQKGTLTVHQRTH 313

  Fly   302 TGERPFACK----------------------------YCGRCFTDYTTRVKHERTHTNERPYVCG 338
            |||:|:.|.                            |||:.|...|...:|:|||:.||||||.
Mouse   314 TGEKPYECTECGKTFYQKLHLIQHQRTHSGEKPYKCGYCGKSFCQKTHLTQHQRTHSGERPYVCH 378

  Fly   339 TCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVHKRHLE 392
            .|||.|:....|.:|..||:|.:.|:|..|.|.|...:.|:||.|:...::..|
Mouse   379 DCGKTFSQKSALNDHQKIHTGVKLYKCSECGKCFCRKSTLTTHMRTHTGEKPYE 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 10/40 (25%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
COG5048 276..>331 CDD:227381 24/82 (29%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:290200 12/51 (24%)
C2H2 Zn finger 309..329 CDD:275368 8/47 (17%)
zf-H2C2_2 324..346 CDD:290200 14/21 (67%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
zf-H2C2_2 350..372 CDD:290200 9/21 (43%)
C2H2 Zn finger 365..383 CDD:275368 7/17 (41%)
Zfp12NP_001276518.1 C2H2 Zn finger 489..509 CDD:275368
C2H2 Zn finger 517..537 CDD:275368
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 573..593 CDD:275368
C2H2 Zn finger 601..621 CDD:275368
C2H2 Zn finger 629..649 CDD:275368
C2H2 Zn finger 657..677 CDD:275368
KRAB 8..68 CDD:214630
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..129
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..198 6/30 (20%)
COG5048 251..677 CDD:227381 62/202 (31%)
C2H2 Zn finger 265..285 CDD:275368 7/19 (37%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
C2H2 Zn finger 321..341 CDD:275368 1/19 (5%)
C2H2 Zn finger 349..369 CDD:275368 7/19 (37%)
C2H2 Zn finger 377..397 CDD:275368 7/19 (37%)
C2H2 Zn finger 405..425 CDD:275368 8/19 (42%)
C2H2 Zn finger 433..453 CDD:275368 101/379 (27%)
C2H2 Zn finger 461..481 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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