DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and Zscan5b

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_573467.2 Gene:Zscan5b / 170734 MGIID:2159640 Length:468 Species:Mus musculus


Alignment Length:353 Identity:96/353 - (27%)
Similarity:149/353 - (42%) Gaps:60/353 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SMELASAVKLRERCIAAQRELLLGLTEEQRQGISAFYRAAVM-GEDIVQTVKTPDDDEVYATYQE 126
            |.||.:..:..|...:.:..:|||:..|:||  ..:.|..:. |.|.|     ||.:|..|:.  
Mouse   171 SRELQNLSETEEPSTSQEEGILLGVIPERRQ--PDYLRPEMSPGSDSV-----PDLEEAEASV-- 226

  Fly   127 IVLEEPKEEIDDTKVEYDNTYYEVAEGHAGEDDAASLIEEADYDSIMAEDEEQQQTLELDEDTEL 191
            .|.::|...:...             |..|...|....|:...|::.:.....::.|.|:.|.:.
Mouse   227 FVGQDPLPALGPA-------------GSLGVKGAVQPQEDTVVDAVPSFTHILERDLALNRDLQS 278

  Fly   192 IVGDVNDAYVYDSDDEVAVLDNVLDDEYEHENIVVKKCSLP----PKPKVRSDDARRRGTGGVYI 252
            :.|     :...:...||......:|..|..|        |    |:|:.:.|....:..   :.
Mouse   279 LSG-----FNLPTSQGVASYMGNTEDGLEAAN--------PEPANPQPEKQVDSLAGQAR---FQ 327

  Fly   253 CEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRCFT 317
            |.:|......:..|:||.|.|.|::.|.|.||...|..:|:|:.|.|.||||:|:.|:.||..|.
Mouse   328 CTECKKSFLYKSRFDLHQRSHTGERPFKCILCNKAFVQSSDLRVHQRVHTGEKPYMCEVCGMEFA 392

  Fly   318 DYTTRVKHERTHTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHF 382
            ..:|...|.|.||.|:|:||..||:.|.....|..|..||...|.|.|:.|:|:|.         
Mouse   393 HGSTLQGHSRVHTKEKPFVCKDCGQRFCHKGNLNVHFRIHCNLRPYVCKKCNKTFR--------- 448

  Fly   383 RSGVHKRHLEKAEMKQVLEQEQKRELKE 410
            :.|..|||     ||..|   :||::.|
Mouse   449 QQGTWKRH-----MKTHL---RKRKVSE 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 4/20 (20%)
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
COG5048 276..>331 CDD:227381 22/54 (41%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
zf-H2C2_2 293..317 CDD:290200 11/23 (48%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
zf-H2C2_2 324..346 CDD:290200 11/21 (52%)
C2H2 Zn finger 337..357 CDD:275368 6/19 (32%)
zf-H2C2_2 350..372 CDD:290200 9/21 (43%)
C2H2 Zn finger 365..383 CDD:275368 4/17 (24%)
Zscan5bNP_573467.2 SCAN 33..117 CDD:153421
C2H2 Zn finger 328..348 CDD:275368 6/19 (32%)
zf-H2C2_2 344..365 CDD:372612 9/20 (45%)
C2H2 Zn finger 356..376 CDD:275368 8/19 (42%)
zf-H2C2_2 368..393 CDD:372612 12/24 (50%)
C2H2 Zn finger 384..404 CDD:275368 7/19 (37%)
zf-H2C2_2 397..419 CDD:372612 10/21 (48%)
zf-C2H2 410..432 CDD:333835 7/21 (33%)
C2H2 Zn finger 412..432 CDD:275368 6/19 (32%)
zf-C2H2 438..460 CDD:333835 11/35 (31%)
C2H2 Zn finger 440..460 CDD:275370 10/33 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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