DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and ZNF480

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_653285.2 Gene:ZNF480 / 147657 HGNCID:23305 Length:535 Species:Homo sapiens


Alignment Length:131 Identity:55/131 - (41%)
Similarity:68/131 - (51%) Gaps:0/131 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 YICEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRC 315
            |.|.:||...........|.|.|.|:|.:.|..|...|...|.|.||.|.||||:|:.|..||:.
Human   371 YKCNECGKVFIQNSHLAQHWRIHTGEKPYKCNECGKVFNQLSNLARHRRIHTGEKPYKCNECGKA 435

  Fly   316 FTDYTTRVKHERTHTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLST 380
            |::|:....|...||.|:||.|..|||||.....|.||..||:|||.|:|..|.|.|....||:.
Human   436 FSEYSGLSAHLVIHTGEKPYKCSECGKAFRHKLSLTNHQRIHTGERPYKCNECGKVFNRIAHLAR 500

  Fly   381 H 381
            |
Human   501 H 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
COG5048 276..>331 CDD:227381 21/54 (39%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
zf-H2C2_2 293..317 CDD:290200 12/23 (52%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
zf-H2C2_2 324..346 CDD:290200 12/21 (57%)
C2H2 Zn finger 337..357 CDD:275368 9/19 (47%)
zf-H2C2_2 350..372 CDD:290200 12/21 (57%)
C2H2 Zn finger 365..383 CDD:275368 7/17 (41%)
ZNF480NP_653285.2 KRAB 27..87 CDD:214630
KRAB 27..66 CDD:279668
COG5048 <158..501 CDD:227381 54/129 (42%)
C2H2 Zn finger 205..225 CDD:275368
zf-H2C2_2 217..242 CDD:290200
C2H2 Zn finger 233..253 CDD:275368
zf-H2C2_2 245..270 CDD:290200
C2H2 Zn finger 261..281 CDD:275368
zf-H2C2_2 273..298 CDD:290200
C2H2 Zn finger 289..309 CDD:275368
zf-H2C2_2 301..326 CDD:290200
C2H2 Zn finger 317..336 CDD:275368
C2H2 Zn finger 345..365 CDD:275368
zf-H2C2_2 358..382 CDD:290200 4/10 (40%)
C2H2 Zn finger 373..393 CDD:275368 5/19 (26%)
zf-H2C2_2 385..410 CDD:290200 8/24 (33%)
zf-C2H2 399..421 CDD:278523 8/21 (38%)
C2H2 Zn finger 401..421 CDD:275368 8/19 (42%)
zf-H2C2_2 413..437 CDD:290200 12/23 (52%)
C2H2 Zn finger 429..449 CDD:275368 6/19 (32%)
zf-H2C2_2 442..466 CDD:290200 12/23 (52%)
C2H2 Zn finger 457..477 CDD:275368 9/19 (47%)
zf-H2C2_2 469..494 CDD:290200 13/24 (54%)
COG5048 481..>529 CDD:227381 9/21 (43%)
C2H2 Zn finger 485..505 CDD:275368 7/17 (41%)
zf-H2C2_2 497..522 CDD:290200 3/5 (60%)
C2H2 Zn finger 513..533 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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