DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and LOC103910773

DIOPT Version :10

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_068076418.1 Gene:LOC103910773 / 103910773 -ID:- Length:433 Species:Danio rerio


Alignment Length:137 Identity:55/137 - (40%)
Similarity:74/137 - (54%) Gaps:2/137 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 YICEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRC 315
            :.|.|||.......:...|.|.|.|:|.|.|..|...|..:|:|.||:..||||:||.|..||:.
Zfish   206 FTCTQCGKSFSQSSSLNHHMRIHTGEKPFTCTHCGKSFIQSSQLNRHIMIHTGEKPFTCTQCGKS 270

  Fly   316 FTDYTTRVKHERTHTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLST 380
            |:..:....|...||.|:|:.|..|||:|:....|..||.|||||:.:.|..|.|||...:||:.
Zfish   271 FSQSSNFNLHMMIHTGEKPFTCTHCGKSFSKSSSLNEHMTIHSGEKPFTCTQCRKSFSCSSHLNH 335

  Fly   381 HFRSGVH 387
            |.|  :|
Zfish   336 HMR--IH 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
COG5048 276..>331 CDD:227381 21/54 (39%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:463886 12/23 (52%)
C2H2 Zn finger 309..329 CDD:275368 5/19 (26%)
zf-H2C2_2 324..346 CDD:463886 10/21 (48%)
C2H2 Zn finger 337..357 CDD:275368 8/19 (42%)
zf-H2C2_2 350..372 CDD:463886 11/21 (52%)
C2H2 Zn finger 365..383 CDD:275368 8/17 (47%)
LOC103910773XP_068076418.1 C2H2 Zn finger 68..88 CDD:275368
COG5048 92..>415 CDD:227381 55/137 (40%)
C2H2 Zn finger 96..116 CDD:275368
C2H2 Zn finger 124..144 CDD:275368
C2H2 Zn finger 152..172 CDD:275368
C2H2 Zn finger 180..200 CDD:275368
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
C2H2 Zn finger 292..312 CDD:275368 8/19 (42%)
C2H2 Zn finger 320..340 CDD:275368 9/21 (43%)
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
C2H2 Zn finger 404..424 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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