DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and Zfp958

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_038944925.1 Gene:Zfp958 / 100302405 RGDID:2311392 Length:495 Species:Rattus norvegicus


Alignment Length:311 Identity:88/311 - (28%)
Similarity:129/311 - (41%) Gaps:59/311 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 TPDDDEVYATYQEIVLEEPKEE--IDDTKVEYDNTYYEV-AEGHAGED---------------DA 160
            |.:|..|..|.:|..|.:|.::  ..|..:|   ||:.: |.|::.||               ..
  Rat     5 TFNDVHVDFTSEEWTLLDPSQKGLYKDVMLE---TYWNLTAIGYSLEDHNIEEHFQSSRRHGRPE 66

  Fly   161 ASLIEEADYDSI-MAEDEEQQQTLELDEDTELIVGD-------VNDAYVYDSDDEVAVLDNVLDD 217
            .|..||..|:.: ..|....:.:|...|.|.  .|:       .:.|:.|.|...:        .
  Rat    67 RSHTEEKPYEDMKCGEAFAHRSSLRAHERTH--TGEKPYGCNQCDKAFAYHSSLRI--------H 121

  Fly   218 EYEHENIVVKKC-----------SLPPKPKVRSDDARRRGTGGVYICEQCGNHIKGRMAFELHCR 271
            |..|....:.||           :|....:..|::...:       |.|||.......:...|.|
  Rat   122 ERTHTGEKLYKCIQCGKAFSDQNTLQRHKRTHSEEKPCK-------CNQCGKAFAHHSSLRKHER 179

  Fly   272 RHRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRCFTDYTTRVKHERTHTNERPYV 336
            .|.|:|.:||..|...|...|.|:||.|.||||:|:.|..|.:.|..:::..|||||||.|:||.
  Rat   180 THTGEKPYGCNQCDKAFACHSSLRRHERTHTGEKPYECNQCDKAFAYHSSLQKHERTHTGEKPYG 244

  Fly   337 CGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVH 387
            |..|.|||.....|:.|...|:||:.|.|..|.|:|...:.|..|.|  :|
  Rat   245 CNQCDKAFACHSSLRKHERTHTGEKPYECNQCGKAFACHSTLRKHER--IH 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
COG5048 276..>331 CDD:227381 24/54 (44%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
zf-H2C2_2 293..317 CDD:290200 11/23 (48%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
zf-H2C2_2 324..346 CDD:290200 15/21 (71%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
zf-H2C2_2 350..372 CDD:290200 9/21 (43%)
C2H2 Zn finger 365..383 CDD:275368 6/17 (35%)
Zfp958XP_038944925.1 KRAB 4..44 CDD:396083 12/41 (29%)
C2H2 Zn finger 80..97 CDD:275368 3/16 (19%)
C2H2 Zn finger 105..125 CDD:275368 4/27 (15%)
COG5048 129..490 CDD:227381 59/174 (34%)
C2H2 Zn finger 133..153 CDD:275368 2/19 (11%)
C2H2 Zn finger 161..181 CDD:275368 6/19 (32%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 7/21 (33%)
C2H2 Zn finger 301..321 CDD:275368
C2H2 Zn finger 329..349 CDD:275368
C2H2 Zn finger 357..377 CDD:275368
C2H2 Zn finger 385..405 CDD:275368
C2H2 Zn finger 413..433 CDD:275368
C2H2 Zn finger 441..461 CDD:275368
C2H2 Zn finger 469..489 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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