DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and znf341

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001108045.1 Gene:znf341 / 100136854 ZFINID:ZDB-GENE-080204-99 Length:796 Species:Danio rerio


Alignment Length:347 Identity:75/347 - (21%)
Similarity:120/347 - (34%) Gaps:98/347 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 VAEGHAGEDDAASLIEEADYDSIMAEDEE------QQQTLELDEDTEL-IVGDVNDAY------- 200
            |:|.|.|:      ::||   .:..||::      .:|.:.:|...:. ...|...:|       
Zfish   380 VSEEHDGD------VQEA---QVQPEDKQSNSNSLNKQMILIDSSYQCQFCSDKFSSYFQLKSHM 435

  Fly   201 -------VY-----DSDDEVAVLDNVLDDEYEHENIVVKKC--------------------SLPP 233
                   ||     ........||..|:..:.|:..:..:|                    |..|
Zfish   436 TQHKGEQVYRCVLKSCSQTFQKLDQFLEHIHTHQEQLTYRCHQCSKVFPSLFELGLHQYTHSFCP 500

  Fly   234 KPKVRSDDARRRGTGGVYICEQCGNHIKGRMAFELH------------------CRR-------- 272
            :...|.:.:       .|.|.:|.:....:.|.|.|                  |.|        
Zfish   501 QQSQRKETS-------YYRCMKCQSKYSTQEALEQHLLNATHNYPCPHCQKVFPCERYFRRHLST 558

  Fly   273 HRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRCFTDYTTRVKHERTHTNERPYVC 337
            |....:|.|::|:..|.|...||.|.:.|:||:||.|..|...|.......:|...|...:.|.|
Zfish   559 HGVGGKFKCQICKKFFKTEHYLKLHTQIHSGEKPFKCSVCEATFNRKDKVKRHMLIHEPFKKYKC 623

  Fly   338 G-----TCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVHKRHLEKAEMK 397
            .     .|.|.|.....||.|:|.|||.:.::|::|.|||....|:..|.||.........:..:
Zfish   624 PFRTHVGCTKEFNRPDKLKAHILSHSGIKPFKCQVCQKSFSRRAHMLEHQRSHTDNYRFRCSTCR 688

  Fly   398 QVLE-----QEQKRELKEEEED 414
            :...     :|.:..|..:|||
Zfish   689 RGFSRHRYYREHRCPLATQEED 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 7/45 (16%)
COG5048 276..>331 CDD:227381 18/54 (33%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:290200 10/23 (43%)
C2H2 Zn finger 309..329 CDD:275368 4/19 (21%)
zf-H2C2_2 324..346 CDD:290200 7/26 (27%)
C2H2 Zn finger 337..357 CDD:275368 8/24 (33%)
zf-H2C2_2 350..372 CDD:290200 10/21 (48%)
C2H2 Zn finger 365..383 CDD:275368 7/17 (41%)
znf341NP_001108045.1 COG5048 295..676 CDD:227381 69/311 (22%)
C2H2 Zn finger 296..316 CDD:275368
zf-H2C2_2 308..333 CDD:290200
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 418..438 CDD:275368 2/19 (11%)
C2H2 Zn finger 446..468 CDD:275368 3/21 (14%)
C2H2 Zn finger 476..496 CDD:275368 1/19 (5%)
C2H2 Zn finger 513..535 CDD:275370 5/21 (24%)
C2H2 Zn finger 539..559 CDD:275368 2/19 (11%)
C2H2 Zn finger 567..587 CDD:275368 7/19 (37%)
zf-H2C2_2 579..604 CDD:290200 11/24 (46%)
C2H2 Zn finger 595..615 CDD:275368 4/19 (21%)
C2H2 Zn finger 623..648 CDD:275368 8/24 (33%)
zf-H2C2_2 641..665 CDD:290200 12/23 (52%)
C2H2 Zn finger 656..676 CDD:275368 8/19 (42%)
C2H2 Zn finger 684..701 CDD:275368 1/16 (6%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579938
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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