DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and znf341

DIOPT Version :10

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001108045.1 Gene:znf341 / 100136854 ZFINID:ZDB-GENE-080204-99 Length:796 Species:Danio rerio


Alignment Length:347 Identity:75/347 - (21%)
Similarity:120/347 - (34%) Gaps:98/347 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 VAEGHAGEDDAASLIEEADYDSIMAEDEE------QQQTLELDEDTEL-IVGDVNDAY------- 200
            |:|.|.|:      ::||   .:..||::      .:|.:.:|...:. ...|...:|       
Zfish   380 VSEEHDGD------VQEA---QVQPEDKQSNSNSLNKQMILIDSSYQCQFCSDKFSSYFQLKSHM 435

  Fly   201 -------VY-----DSDDEVAVLDNVLDDEYEHENIVVKKC--------------------SLPP 233
                   ||     ........||..|:..:.|:..:..:|                    |..|
Zfish   436 TQHKGEQVYRCVLKSCSQTFQKLDQFLEHIHTHQEQLTYRCHQCSKVFPSLFELGLHQYTHSFCP 500

  Fly   234 KPKVRSDDARRRGTGGVYICEQCGNHIKGRMAFELH------------------CRR-------- 272
            :...|.:.:       .|.|.:|.:....:.|.|.|                  |.|        
Zfish   501 QQSQRKETS-------YYRCMKCQSKYSTQEALEQHLLNATHNYPCPHCQKVFPCERYFRRHLST 558

  Fly   273 HRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRCFTDYTTRVKHERTHTNERPYVC 337
            |....:|.|::|:..|.|...||.|.:.|:||:||.|..|...|.......:|...|...:.|.|
Zfish   559 HGVGGKFKCQICKKFFKTEHYLKLHTQIHSGEKPFKCSVCEATFNRKDKVKRHMLIHEPFKKYKC 623

  Fly   338 G-----TCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRSGVHKRHLEKAEMK 397
            .     .|.|.|.....||.|:|.|||.:.::|::|.|||....|:..|.||.........:..:
Zfish   624 PFRTHVGCTKEFNRPDKLKAHILSHSGIKPFKCQVCQKSFSRRAHMLEHQRSHTDNYRFRCSTCR 688

  Fly   398 QVLE-----QEQKRELKEEEED 414
            :...     :|.:..|..:|||
Zfish   689 RGFSRHRYYREHRCPLATQEED 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 7/45 (16%)
COG5048 276..>331 CDD:227381 18/54 (33%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:463886 10/23 (43%)
C2H2 Zn finger 309..329 CDD:275368 4/19 (21%)
zf-H2C2_2 324..346 CDD:463886 7/26 (27%)
C2H2 Zn finger 337..357 CDD:275368 8/24 (33%)
zf-H2C2_2 350..372 CDD:463886 10/21 (48%)
C2H2 Zn finger 365..383 CDD:275368 7/17 (41%)
znf341NP_001108045.1 COG5048 295..676 CDD:227381 69/311 (22%)
C2H2 Zn finger 296..316 CDD:275368
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 418..438 CDD:275368 2/19 (11%)
C2H2 Zn finger 446..468 CDD:275368 3/21 (14%)
C2H2 Zn finger 476..496 CDD:275368 1/19 (5%)
C2H2 Zn finger 513..535 CDD:275370 5/21 (24%)
C2H2 Zn finger 539..559 CDD:275368 2/19 (11%)
C2H2 Zn finger 567..587 CDD:275368 7/19 (37%)
C2H2 Zn finger 595..615 CDD:275368 4/19 (21%)
C2H2 Zn finger 623..648 CDD:275368 8/24 (33%)
C2H2 Zn finger 656..676 CDD:275368 8/19 (42%)
C2H2 Zn finger 684..701 CDD:275368 1/16 (6%)
Blue background indicates that the domain is not in the aligned region.

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