DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and si:dkeyp-53d3.6

DIOPT Version :10

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_005161585.1 Gene:si:dkeyp-53d3.6 / 100006266 ZFINID:ZDB-LINCRNAG-050208-390 Length:307 Species:Danio rerio


Alignment Length:219 Identity:63/219 - (28%)
Similarity:100/219 - (45%) Gaps:42/219 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 VNDAYVYDSDDEVAVLDNVLDDEYEHENIVVKKCSLPPKPKVRSDDARRRGTGGVYICEQCGNHI 260
            :|.:.:.|.::|:|.::.. ....|::|          :|:.|::.:        :.|.||....
Zfish    14 LNVSELMDENEELADVEGT-KQHVENDN----------QPEPRNEKS--------FACPQCEKTF 59

  Fly   261 KGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRCFTDYTTRVKH 325
            |.:....:|.|.|.|:|.:.||.|..||......:.|.|.||||:|:.|.:||:.|....|...|
Zfish    60 KFKHHLRIHLRVHTGEKPYACEFCGHRFKYERSFQEHRRIHTGEKPYRCVHCGKTFAYKNTYKIH 124

  Fly   326 ERTHTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDK----SFMLPTHLSTHFRS-- 384
            .|.||.|:||:|..|.|:||....|..|:..||||:.:.||.|.|    :|.:..|:..|.:.  
Zfish   125 TRIHTGEQPYMCNQCEKSFTHARSLHAHLRTHSGEKPFPCEQCGKTFATAFAVRKHVKIHLKEKP 189

  Fly   385 ----------------GVH-KRHL 391
                            .:| |||:
Zfish   190 YICTLCGKGFTEAGSLNIHQKRHI 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 6/19 (32%)
COG5048 276..>331 CDD:227381 21/54 (39%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:463886 10/23 (43%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
zf-H2C2_2 324..346 CDD:463886 11/21 (52%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
zf-H2C2_2 350..372 CDD:463886 10/25 (40%)
C2H2 Zn finger 365..383 CDD:275368 7/21 (33%)
si:dkeyp-53d3.6XP_005161585.1 COG5048 39..>307 CDD:227381 58/193 (30%)
C2H2 Zn finger 52..72 CDD:275368 6/19 (32%)
C2H2 Zn finger 80..100 CDD:275368 7/19 (37%)
C2H2 Zn finger 108..128 CDD:275368 7/19 (37%)
C2H2 Zn finger 136..156 CDD:275368 7/19 (37%)
C2H2 Zn finger 164..184 CDD:275368 6/19 (32%)
C2H2 Zn finger 192..212 CDD:275368 2/19 (11%)
C2H2 Zn finger 220..240 CDD:275368
C2H2 Zn finger 248..268 CDD:275368
C2H2 Zn finger 276..294 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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