DRSC/TRiP Functional Genomics Resources

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Protein Alignment M1BP and bcl6ab

DIOPT Version :9

Sequence 1:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_005171194.1 Gene:bcl6ab / 100001936 ZFINID:ZDB-GENE-030131-7523 Length:566 Species:Danio rerio


Alignment Length:388 Identity:99/388 - (25%)
Similarity:143/388 - (36%) Gaps:116/388 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AKYASNKRSPKLFERSNTKMIDNIEAL-TG-----LRLENYGCLPDQICEC--CSMELASAVKLR 73
            |:...|:::|.|     :..::||||. ||     ||.:   |.|:...|.  ||...||     
Zfish   251 ARAEGNRKAPLL-----SSEVENIEACHTGGPESPLRSD---CQPNSPAESSGCSRRPAS----- 302

  Fly    74 ERCIAAQRELLLGLTEEQRQGISAFYRAAVMGEDIVQTVKTPDDDEVYA------TYQEIVLEEP 132
                                                     |.....||      .|:.|||   
Zfish   303 -----------------------------------------PPSSITYAKVHNWKKYKFIVL--- 323

  Fly   133 KEEIDDTKVEYDNTYYEV----AEGHAGEDDAASLIEEADYDSIMAEDEEQQQTLELDEDTELIV 193
             ...|::.:...:|..|.    || |.|:|:.::  :|.      .:.||...::......|..:
Zfish   324 -NSTDNSSLTPPHTVSESTNQNAE-HKGQDNRST--DEC------IKKEEHGSSVHNTFTEESSM 378

  Fly   194 GDVNDAYVYDSDDEVAVLDNVLDDEYEHENIVVKKC-SLPPKPKVRSDDARRRGTGGVYICEQCG 257
            |..|.|                    |.|.:...:| |...||:...|       |..|.|::|.
Zfish   379 GSTNSA--------------------ERERVYCNECESEAEKPQWLQD-------GKPYKCDRCQ 416

  Fly   258 N--HIKGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRCFTDYT 320
            .  |.||. ....|...|.|:|.:.|.:|.::|...:.||.|.|.|:||:|:.|:.|...|....
Zfish   417 AMFHYKGN-PLSSHKSVHTGEKPYRCNVCGAQFNRPANLKTHSRIHSGEKPYKCETCSSRFVQVA 480

  Fly   321 TRVKHERTHTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFR 383
            ....|...||.|:||.|..||..|.....||:|:.||:||:.|.||.||..|...:.|..|.|
Zfish   481 HLRAHVLIHTGEKPYPCDICGTRFRHLQTLKSHLRIHTGEKPYHCENCDLRFRHKSQLRLHLR 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 19/74 (26%)
C2H2 Zn finger 253..273 CDD:275368 6/21 (29%)
COG5048 276..>331 CDD:227381 17/54 (31%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
zf-H2C2_2 293..317 CDD:290200 10/23 (43%)
C2H2 Zn finger 309..329 CDD:275368 4/19 (21%)
zf-H2C2_2 324..346 CDD:290200 10/21 (48%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
zf-H2C2_2 350..372 CDD:290200 12/21 (57%)
C2H2 Zn finger 365..383 CDD:275368 7/17 (41%)
bcl6abXP_005171194.1 BTB 22..126 CDD:279045
BTB 33..128 CDD:197585
C2H2 Zn finger 412..433 CDD:275368 6/21 (29%)
zf-H2C2_2 426..450 CDD:290200 7/23 (30%)
C2H2 Zn finger 441..461 CDD:275368 7/19 (37%)
zf-H2C2_2 453..478 CDD:290200 11/24 (46%)
C2H2 Zn finger 469..489 CDD:275368 4/19 (21%)
zf-H2C2_2 481..506 CDD:290200 10/24 (42%)
C2H2 Zn finger 497..517 CDD:275368 7/19 (37%)
zf-H2C2_2 510..534 CDD:290200 13/23 (57%)
C2H2 Zn finger 525..543 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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