DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF561

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_024307548.1 Gene:ZNF561 / 93134 HGNCID:28684 Length:502 Species:Homo sapiens


Alignment Length:137 Identity:54/137 - (39%)
Similarity:77/137 - (56%) Gaps:4/137 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 RTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCS 258
            ::|.|:|||...::......|.:.|.|:|...|.:|...|....:|..|:|.|||.||::|:.|.
Human   295 KSFECKECGRSFRNSSCLNDHIQIHTGIKPHKCTYCGKAFTRSTQLTEHVRTHTGIKPYECKECG 359

  Fly   259 RSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLF----SR 319
            ::|:.||....|.|:|:.::|:.||||..|||||..|..|..:|||||.:.|..|.|.|    .|
Human   360 QAFAQYSGLSIHIRSHSGKKPYQCKECGKAFTTSTSLIQHTRIHTGEKPYECVECGKTFITSSRR 424

  Fly   320 YTHLTTH 326
            ..||.||
Human   425 SKHLKTH 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 20/53 (38%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 10/23 (43%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 11/19 (58%)
zf-H2C2_2 295..319 CDD:290200 11/27 (41%)
C2H2 Zn finger 310..328 CDD:275368 9/21 (43%)
ZNF561XP_024307548.1 KRAB 56..96 CDD:307490
C2H2 Zn finger 190..207 CDD:275370
C2H2 Zn finger 215..235 CDD:275368
C2H2 Zn finger 243..263 CDD:275368
COG5048 <287..483 CDD:227381 54/137 (39%)
C2H2 Zn finger 299..319 CDD:275368 5/19 (26%)
C2H2 Zn finger 327..347 CDD:275368 6/19 (32%)
C2H2 Zn finger 355..375 CDD:275368 7/19 (37%)
C2H2 Zn finger 383..403 CDD:275368 11/19 (58%)
C2H2 Zn finger 411..431 CDD:275368 7/19 (37%)
C2H2 Zn finger 439..459 CDD:275368
C2H2 Zn finger 467..487 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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