DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ranshi and ZNF845

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001308451.1 Gene:ZNF845 / 91664 HGNCID:25112 Length:970 Species:Homo sapiens


Alignment Length:366 Identity:97/366 - (26%)
Similarity:143/366 - (39%) Gaps:92/366 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCST--LPNRLCASCQTCLQQAISFRER 68
            |..|||..|.:|.|                   |..:.|.|  .|.: |..|.....|.::.  .
Human   245 CDVCGKVFNQKRYL-------------------ACHRRCHTGKKPYK-CNDCGKTFSQELTL--T 287

  Fly    69 CLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPIQSSGFKVED 133
            |    ...||:.:..   ..|.|..|:......|.:..|           ::.|   ...:|.  
Human   288 C----HHRLHTGEKH---YKCSECGKTFSRNSALVIHKA-----------IHTG---EKSYKC-- 329

  Fly   134 ILNESKINEDEPNNEDDIDYSEMDYLIYE----------SDTEVDAKQELKSDSENPKKRRNRRN 188
                         ||....:|:..||:|.          ...|.|.....||:.|..:|......
Human   330 -------------NECGKTFSQTSYLVYHRRLHTGEKPYKCEECDKAFSFKSNLERHRKIHTGEK 381

  Fly   189 P---RDSNRTFF-------------------CEECGNHIKDRISFILHCKRHRGVKEFGCEFCED 231
            |   .:.:|||.                   |.:||.......|.:.|.:.|.|.|.:.||.|::
Human   382 PYKCNECSRTFSRKSSLTRHRRLHTGEKPYKCNDCGKTFSQMSSLVYHRRLHTGEKPYKCEECDE 446

  Fly   232 RFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILK 296
            .|...:.|:||.|.||||||:||..|.::||..|:.:.|.|.||.|:|:.|:||:.||:....|:
Human   447 AFSFKSNLERHRRIHTGEKPYKCNDCGKTFSQTSSLVYHRRLHTGEKPYKCEECDEAFSFKSNLE 511

  Fly   297 NHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRRNMQ 337
            .|.::|||||.::|:.|.|.|||.:.||.|.|.:...:..|
Human   512 RHRIIHTGEKLYKCNECGKTFSRKSSLTRHCRLHTGEKPYQ 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 15/72 (21%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 24/53 (45%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
zf-H2C2_2 238..262 CDD:290200 13/23 (57%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 11/21 (52%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 9/17 (53%)
ZNF845NP_001308451.1 KRAB 8..>48 CDD:214630
KRAB 8..47 CDD:279668
COG5048 169..564 CDD:227381 97/366 (27%)
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368 8/38 (21%)
C2H2 Zn finger 273..293 CDD:275368 4/25 (16%)
C2H2 Zn finger 301..321 CDD:275368 5/30 (17%)
C2H2 Zn finger 329..349 CDD:275368 6/34 (18%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
zf-H2C2_2 369..394 CDD:290200 6/24 (25%)
COG5048 381..813 CDD:227381 61/172 (35%)
C2H2 Zn finger 385..405 CDD:275368 3/19 (16%)
zf-H2C2_2 397..422 CDD:290200 3/24 (13%)
C2H2 Zn finger 413..433 CDD:275368 5/19 (26%)
C2H2 Zn finger 441..461 CDD:275368 8/19 (42%)
zf-H2C2_2 453..478 CDD:290200 14/24 (58%)
C2H2 Zn finger 469..489 CDD:275368 7/19 (37%)
C2H2 Zn finger 497..517 CDD:275368 7/19 (37%)
zf-H2C2_2 509..534 CDD:290200 11/24 (46%)
C2H2 Zn finger 525..545 CDD:275368 10/19 (53%)
zf-H2C2_2 537..560 CDD:290200 5/16 (31%)
C2H2 Zn finger 553..573 CDD:275368 97/366 (27%)
C2H2 Zn finger 581..601 CDD:275368
C2H2 Zn finger 609..629 CDD:275368
C2H2 Zn finger 637..657 CDD:275368
zf-H2C2_2 649..674 CDD:290200
C2H2 Zn finger 665..685 CDD:275368
C2H2 Zn finger 693..713 CDD:275368
C2H2 Zn finger 721..741 CDD:275368
C2H2 Zn finger 749..769 CDD:275368
zf-H2C2_2 761..786 CDD:290200
C2H2 Zn finger 777..797 CDD:275368
C2H2 Zn finger 805..825 CDD:275368
C2H2 Zn finger 833..853 CDD:275368
zf-H2C2_2 845..870 CDD:290200
C2H2 Zn finger 861..881 CDD:275368
zf-H2C2_2 873..898 CDD:290200
C2H2 Zn finger 889..909 CDD:275368
C2H2 Zn finger 917..937 CDD:275368
C2H2 Zn finger 945..965 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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