DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF251

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_612376.1 Gene:ZNF251 / 90987 HGNCID:13045 Length:671 Species:Homo sapiens


Alignment Length:327 Identity:87/327 - (26%)
Similarity:125/327 - (38%) Gaps:74/327 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 LEVQREL----LHSQDDEDFLRICQESPK-------SVLEQ---EELE-------------LDLA 107
            ||..:||    |...::.|.|:.||:..:       |:|.|   ||::             ...|
Human    67 LEQGKELWVLNLLGAEEPDILKSCQKDSEVGTKKELSILNQKFSEEVKTPEFVSRRLLRDNAQAA 131

  Fly   108 EISIEVERLDDLNEGPIQSSGFKV------EDILNESKINEDEPNNEDDIDYSEMDYLIYESDTE 166
            |......|...|.|....|:|..:      :.:|.|:.:..:....|...:.|..|         
Human   132 EFREAWGREGKLKERVGNSAGQSLNKPNIHKRVLTEATVGRERSLGERTQECSAFD--------- 187

  Fly   167 VDAKQELKSDSENPKKRRNRRNPR------------------------DSNRTFFCEECGNHIKD 207
                :.|..|....:.:||:...|                        ...:.:.|..||.....
Human   188 ----RNLNLDQNVVRLQRNKTGERVFKCDICSKTFKYNSDLSRHQRSHTGEKPYECGRCGRAFTH 248

  Fly   208 RISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHER 272
            ..:.:||...|.|.|.|.|:.|...|...:.|:.|.|.|||||||.|..|.::||..||.::|..
Human   249 SSNLVLHHHIHTGNKPFKCDECGKTFGLNSHLRLHRRIHTGEKPFGCGECGKAFSRSSTLIQHRI 313

  Fly   273 THTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYR----SNAHR 333
            .||.|:|:.|.||...|:.|..|..|..:|||||...|..|.|.|||.:.|..|.|    ...|:
Human   314 IHTGEKPYKCNECGRGFSQSPQLTQHQRIHTGEKPHECSHCGKAFSRSSSLIQHERIHTGEKPHK 378

  Fly   334 RN 335
            .|
Human   379 CN 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 4/10 (40%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 23/53 (43%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 9/21 (43%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
ZNF251NP_612376.1 KRAB 15..75 CDD:214630 4/7 (57%)
C2H2 Zn finger 181..203 CDD:275368 5/34 (15%)
COG5048 207..635 CDD:227381 57/174 (33%)
C2H2 Zn finger 211..231 CDD:275368 0/19 (0%)
C2H2 Zn finger 239..259 CDD:275368 5/19 (26%)
C2H2 Zn finger 267..287 CDD:275368 6/19 (32%)
C2H2 Zn finger 295..315 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..371 CDD:275368 9/19 (47%)
C2H2 Zn finger 379..399 CDD:275368 1/2 (50%)
C2H2 Zn finger 407..427 CDD:275368
C2H2 Zn finger 435..455 CDD:275368
C2H2 Zn finger 463..483 CDD:275368
C2H2 Zn finger 491..511 CDD:275368
C2H2 Zn finger 568..588 CDD:275368
C2H2 Zn finger 596..616 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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