DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF160

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001096073.1 Gene:ZNF160 / 90338 HGNCID:12948 Length:818 Species:Homo sapiens


Alignment Length:381 Identity:97/381 - (25%)
Similarity:145/381 - (38%) Gaps:87/381 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISFRE--- 67
            |..|||         :| .:|...:.|.::.||.....|:.............:.|.|...|   
Human   371 CNECGK---------LF-TQNSHLISHWRIHTGEKPYKCNECGKAFSVRSSLAIHQTIHTGEKPY 425

  Fly    68 RCLEVQRELLHSQDDEDFLRI--------CQESPKSVLEQEELELDLAEISIEVERLDDLNEGPI 124
            :|.|..:...::.......|:        |.|..|:.    .:..:||...:       ::.|  
Human   426 KCNECGKVFRYNSYLGRHRRVHTGEKPYKCNECGKAF----SMHSNLATHQV-------IHTG-- 477

  Fly   125 QSSGFKVEDILNESKI--NEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKS-----DSENPKK 182
             :..||..:.   ||:  ...:..|...|...|..|...|.......:..|.:     ..|.|.|
Human   478 -TKPFKCNEC---SKVFTQNSQLANHRRIHTGEKPYKCNECGKAFSVRSSLTTHQAIHSGEKPYK 538

  Fly   183 RRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGV----KEFGCEFCEDRFCTPAELKRHI 243
                           |.|||.....:    .|.:.|||:    |.:.|..|...|...::|.||.
Human   539 ---------------CIECGKSFTQK----SHLRSHRGIHSGEKPYKCNECGKVFAQTSQLARHW 584

  Fly   244 RKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAF 308
            |.||||||:||..|.|:|||.|:...|:..||.|:|:.|.||...|..:..|..|..:|||||.:
Human   585 RVHTGEKPYKCNDCGRAFSDRSSLTFHQAIHTGEKPYKCHECGKVFRHNSYLATHRRIHTGEKPY 649

  Fly   309 RCDLCDKLFSRYTHLTTH------------------YRSNAHRRNMQKADTIFDKP 346
            :|:.|.|.||.:::||||                  :..|:|..|.|:..| .:||
Human   650 KCNECGKAFSMHSNLTTHKVIHTGEKPYKCNQCGKVFTQNSHLANHQRTHT-GEKP 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 15/73 (21%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 24/53 (45%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 14/23 (61%)
C2H2 Zn finger 254..274 CDD:275368 8/19 (42%)
zf-H2C2_2 269..291 CDD:290200 9/21 (43%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 9/35 (26%)
ZNF160NP_001096073.1 KRAB 8..68 CDD:214630
KRAB 8..47 CDD:279668
zf-C2H2 257..279 CDD:278523
C2H2 Zn finger 259..279 CDD:275368
zf-H2C2_2 271..295 CDD:290200
C2H2 Zn finger 287..307 CDD:275368
zf-H2C2_2 299..324 CDD:290200
C2H2 Zn finger 315..335 CDD:275368
zf-H2C2_2 327..350 CDD:290200
C2H2 Zn finger 343..363 CDD:275368
zf-H2C2_2 355..380 CDD:290200 5/18 (28%)
COG5048 367..810 CDD:227381 97/381 (25%)
C2H2 Zn finger 371..391 CDD:275368 7/29 (24%)
C2H2 Zn finger 399..419 CDD:275368 2/19 (11%)
zf-H2C2_2 411..436 CDD:290200 5/24 (21%)
C2H2 Zn finger 427..447 CDD:275368 3/19 (16%)
zf-H2C2_2 439..463 CDD:290200 4/27 (15%)
C2H2 Zn finger 455..475 CDD:275368 5/30 (17%)
C2H2 Zn finger 483..503 CDD:275368 3/22 (14%)
zf-H2C2_2 496..519 CDD:290200 5/22 (23%)
C2H2 Zn finger 511..531 CDD:275368 2/19 (11%)
zf-H2C2_2 523..548 CDD:290200 8/39 (21%)
C2H2 Zn finger 539..559 CDD:275368 8/23 (35%)
zf-H2C2_2 551..576 CDD:290200 8/24 (33%)
C2H2 Zn finger 567..587 CDD:275368 7/19 (37%)
C2H2 Zn finger 595..615 CDD:275368 8/19 (42%)
zf-H2C2_2 607..632 CDD:290200 9/24 (38%)
C2H2 Zn finger 623..643 CDD:275368 6/19 (32%)
zf-H2C2_2 635..659 CDD:290200 10/23 (43%)
C2H2 Zn finger 651..671 CDD:275368 9/19 (47%)
zf-H2C2_2 663..688 CDD:290200 4/24 (17%)
C2H2 Zn finger 679..699 CDD:275368 4/19 (21%)
zf-H2C2_2 691..715 CDD:290200 6/15 (40%)
C2H2 Zn finger 707..727 CDD:275368
zf-H2C2_2 719..744 CDD:290200
C2H2 Zn finger 735..755 CDD:275368
zf-H2C2_2 747..770 CDD:290200
C2H2 Zn finger 763..783 CDD:275368
zf-H2C2_2 775..800 CDD:290200
C2H2 Zn finger 791..811 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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