DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF616

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_848618.2 Gene:ZNF616 / 90317 HGNCID:28062 Length:781 Species:Homo sapiens


Alignment Length:397 Identity:98/397 - (24%)
Similarity:153/397 - (38%) Gaps:79/397 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAI------- 63
            |..|||.         |.:|....| |..:.||.....|:........|....:.|.|       
Human   299 CNLCGKS---------FSQRVHLRL-HQTVHTGERPFKCNECGKTFKRSSNLTVHQVIHAGKKPY 353

  Fly    64 -------SFRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNE 121
                   :||.|...|....:||.:.:   ..|.|..|...::..|.:.....:  ||:....||
Human   354 KCDVCGKAFRHRSNLVCHRRIHSGEKQ---YKCNECGKVFSKRSSLAVHRRIHT--VEKPCKCNE 413

  Fly   122 -GPIQSSGFKVEDILNESKINEDEPN---NEDDIDYSEMDYL--------------------IYE 162
             |.:.|   |...:....:|:..:..   |:....||:..:|                    ::.
Human   414 CGKVFS---KRSSLAVHQRIHTGQKTYKCNKCGKVYSKHSHLAVHWRIHTGEKAYKCNECGKVFS 475

  Fly   163 SDTEVDAKQELKSDSENPKK---------RRNR----RNPRDSNRTFFCEECGNHIKDRISFILH 214
            ..:.:.|.|.:.: .|.|.|         :.:|    |......:.:.|:|||....||.:|..|
Human   476 IHSRLAAHQRIHT-GEKPYKCNECGKVFSQHSRLAVHRRIHTGEKPYKCKECGKVFSDRSAFARH 539

  Fly   215 CKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERP 279
            .:.|.|.|.:.|:.|...|...:.|..|.|.|:||||:||..|.:.:|.||..:.|.|.||.|:|
Human   540 RRIHTGEKPYKCKECGKVFSQCSRLTVHRRIHSGEKPYKCNECGKVYSQYSHLVGHRRVHTGEKP 604

  Fly   280 FVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTH---------YRSNAHRRN 335
            :.|.||..||.....|..|..:|||||.::|:.|...||:..||..|         |:.|...:.
Human   605 YKCHECGKAFNQGSTLNRHQRIHTGEKPYKCNQCGNSFSQRVHLRLHQTVHTGDRPYKCNECGKT 669

  Fly   336 MQKADTI 342
            .:::..:
Human   670 FKRSSNL 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 18/84 (21%)
C2H2 Zn finger 198..218 CDD:275368 8/19 (42%)
COG5048 222..>276 CDD:227381 21/53 (40%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 11/23 (48%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 11/21 (52%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 10/23 (43%)
C2H2 Zn finger 310..328 CDD:275368 7/26 (27%)
ZNF616NP_848618.2 KRAB 7..61 CDD:214630
KRAB 7..46 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 105..129
C2H2 Zn finger 187..207 CDD:275368
zf-H2C2_2 199..224 CDD:290200
C2H2 Zn finger 243..263 CDD:275368
COG5048 266..707 CDD:227381 98/397 (25%)
C2H2 Zn finger 271..291 CDD:275368
zf-H2C2_2 283..308 CDD:290200 5/17 (29%)
C2H2 Zn finger 299..319 CDD:275368 8/29 (28%)
zf-H2C2_2 311..336 CDD:290200 5/25 (20%)
C2H2 Zn finger 327..347 CDD:275368 3/19 (16%)
C2H2 Zn finger 355..375 CDD:275368 4/19 (21%)
C2H2 Zn finger 383..403 CDD:275368 4/19 (21%)
C2H2 Zn finger 411..431 CDD:275368 5/22 (23%)
C2H2 Zn finger 439..459 CDD:275368 4/19 (21%)
C2H2 Zn finger 467..487 CDD:275368 2/19 (11%)
zf-H2C2_2 480..504 CDD:290200 5/24 (21%)
C2H2 Zn finger 495..515 CDD:275368 2/19 (11%)
zf-H2C2_2 508..531 CDD:290200 5/22 (23%)
C2H2 Zn finger 523..543 CDD:275368 8/19 (42%)
zf-H2C2_2 538..560 CDD:290200 7/21 (33%)
C2H2 Zn finger 551..571 CDD:275368 6/19 (32%)
C2H2 Zn finger 579..599 CDD:275368 7/19 (37%)
zf-H2C2_2 591..616 CDD:290200 11/24 (46%)
C2H2 Zn finger 607..627 CDD:275368 7/19 (37%)
zf-H2C2_2 620..644 CDD:290200 10/23 (43%)
C2H2 Zn finger 635..655 CDD:275368 7/19 (37%)
zf-H2C2_2 647..672 CDD:290200 5/24 (21%)
C2H2 Zn finger 663..683 CDD:275368 1/14 (7%)
C2H2 Zn finger 691..711 CDD:275368
zf-H2C2_2 703..728 CDD:290200
C2H2 Zn finger 719..739 CDD:275368
zf-H2C2_2 731..754 CDD:290200
C2H2 Zn finger 747..767 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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