DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ranshi and ZNF341

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001269862.1 Gene:ZNF341 / 84905 HGNCID:15992 Length:854 Species:Homo sapiens


Alignment Length:185 Identity:50/185 - (27%)
Similarity:69/185 - (37%) Gaps:41/185 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 RRNPRDSNRTFFCEECGNHIK--DRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTG 248
            :.:|:..|..:.|.:|.|...  :.:...|....|    .|.|..|:..|.....|:||:..|..
Human   530 QHSPKKDNAVYKCVKCVNKYSTPEALEHHLQTATH----NFPCPHCQKVFPCERYLRRHLPTHGS 590

  Fly   249 EKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLV------------ 301
            ...|||:.|.:.|........|...|:.|:|:.|..|.:||.....||.|||:            
Human   591 GGRFKCQVCKKFFRREHYLKLHAHIHSGEKPYKCSVCESAFNRKDKLKRHMLIHEPFKKYKCPFS 655

  Fly   302 ---------------------HTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRRN 335
                                 |:|.|..:|.||.|.|||..||..|.|  ||..|
Human   656 THTGCSKEFNRPDKLKAHILSHSGMKLHKCALCSKSFSRRAHLAEHQR--AHTGN 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 4/21 (19%)
COG5048 222..>276 CDD:227381 15/53 (28%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 8/23 (35%)
C2H2 Zn finger 254..274 CDD:275368 4/19 (21%)
zf-H2C2_2 269..291 CDD:290200 8/21 (38%)
C2H2 Zn finger 282..302 CDD:275368 9/52 (17%)
zf-H2C2_2 295..319 CDD:290200 13/56 (23%)
C2H2 Zn finger 310..328 CDD:275368 10/17 (59%)
ZNF341NP_001269862.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..217
COG5048 323..729 CDD:227381 50/185 (27%)
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 352..372 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..434
C2H2 Zn finger 447..467 CDD:275368
C2H2 Zn finger 475..497 CDD:275368
C2H2 Zn finger 505..525 CDD:275368
C2H2 Zn finger 542..562 CDD:275370 4/19 (21%)
C2H2 Zn finger 568..588 CDD:275368 6/19 (32%)
C2H2 Zn finger 596..616 CDD:275368 4/19 (21%)
C2H2 Zn finger 624..644 CDD:275368 9/19 (47%)
C2H2 Zn finger 652..677 CDD:275368 0/24 (0%)
C2H2 Zn finger 685..705 CDD:275368 11/21 (52%)
C2H2 Zn finger 713..730 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 731..763
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146332
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.