DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ranshi and ZNF527

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_115829.1 Gene:ZNF527 / 84503 HGNCID:29385 Length:609 Species:Homo sapiens


Alignment Length:408 Identity:99/408 - (24%)
Similarity:147/408 - (36%) Gaps:144/408 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 ISFRERCLE---VQRELL--HSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEG 122
            ||..|:..|   |:|::.  |..|.|.:..|.:.|||..::::|:..::.     :|||  .:.|
Human    63 ISLLEQGKEPWMVERKMSQGHCADWESWCEIEELSPKWFIDEDEISQEMV-----MERL--ASHG 120

  Fly   123 PIQSSGFK-------------------------VEDILNESKINE-------------------- 142
             ::.|.|:                         |::|....:.||                    
Human   121 -LECSSFREAWKYKGEFELHQGNAERHFMQVTAVKEISTGKRDNEFSNSGRSIPLKSVFLTQQKV 184

  Fly   143 ------------DE--PNNEDDIDY----SEMDYLIYESDTEVDAKQELKSD-----SENPKKRR 184
                        |:  |.|...|:|    :|.:.||.....|.:....|..|     .|.|.:..
Human   185 PTIQQVHKFDIYDKLFPQNSVIIEYKRLHAEKESLIGNECEEFNQSTYLSKDIGIPPGEKPYESH 249

  Fly   185 N-----------------------------------------RRNPRDSNRTFFCEECGNHIKDR 208
            :                                         .:......:.:.|.:||......
Human   250 DFSKLLSFHSLFTQHQTTHFGKLPHGYDECGDAFSCYSFFTQPQRIHSGEKPYACNDCGKAFSHD 314

  Fly   209 ISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERT 273
            .....|.:.|.|.|.:.|:.|...|...|.|.:|.|.|||||||.|..|.::||.|:..::|:|.
Human   315 FFLSEHQRTHIGEKPYECKECNKAFRQSAHLAQHQRIHTGEKPFACNECGKAFSRYAFLVEHQRI 379

  Fly   274 HTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTH------------ 326
            ||.|:|:.|||||.||..|..|..|..:|||||.:.|:.|.|.|||...||.|            
Human   380 HTGEKPYECKECNKAFRQSAHLNQHQRIHTGEKPYECNQCGKAFSRRIALTLHQRIHTGEKPFKC 444

  Fly   327 --------YRS--NAHRR 334
                    |||  |.|:|
Human   445 SECGKTFGYRSHLNQHQR 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 6/16 (38%)
C2H2 Zn finger 198..218 CDD:275368 4/19 (21%)
COG5048 222..>276 CDD:227381 23/53 (43%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 13/21 (62%)
C2H2 Zn finger 282..302 CDD:275368 10/19 (53%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 9/37 (24%)
ZNF527NP_115829.1 KRAB 14..53 CDD:279668
C2H2 Zn finger 222..240 CDD:275368 3/17 (18%)
C2H2 Zn finger 252..268 CDD:275368 0/15 (0%)
C2H2 Zn finger 277..296 CDD:275368 0/18 (0%)
C2H2 Zn finger 304..324 CDD:275368 4/19 (21%)
zf-H2C2_2 317..341 CDD:290200 7/23 (30%)
COG5048 <328..490 CDD:227381 56/135 (41%)
C2H2 Zn finger 332..352 CDD:275368 7/19 (37%)
zf-H2C2_2 344..369 CDD:290200 13/24 (54%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
zf-H2C2_2 373..397 CDD:290200 13/23 (57%)
C2H2 Zn finger 388..408 CDD:275368 10/19 (53%)
zf-H2C2_2 400..425 CDD:290200 11/24 (46%)
C2H2 Zn finger 416..436 CDD:275368 9/19 (47%)
zf-H2C2_2 428..453 CDD:290200 3/24 (13%)
C2H2 Zn finger 444..464 CDD:275368 6/19 (32%)
zf-H2C2_2 456..481 CDD:290200 3/7 (43%)
C2H2 Zn finger 472..492 CDD:275368
zf-H2C2_2 485..508 CDD:290200
C2H2 Zn finger 500..520 CDD:275368
zf-H2C2_2 516..537 CDD:290200
C2H2 Zn finger 528..548 CDD:275368
zf-H2C2_2 540..565 CDD:290200
C2H2 Zn finger 556..576 CDD:275368
zf-H2C2_2 568..593 CDD:290200
C2H2 Zn finger 584..604 CDD:275368
KRAB 14..74 CDD:214630 4/10 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.