DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF528

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_006723481.1 Gene:ZNF528 / 84436 HGNCID:29384 Length:712 Species:Homo sapiens


Alignment Length:244 Identity:73/244 - (29%)
Similarity:108/244 - (44%) Gaps:29/244 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 LEQEELELDLAEISI------EVERLDDLNEGPIQSSGFKVED-ILNESKINEDEP---NNEDDI 151
            |...:|:|..||..|      |....|:.:..|::.....|:. :||:.:.|.|..   ..|...
Human   199 LHLSDLQLFQAERKISGCKHFEKPVSDNSSVSPLEKISSSVKSHLLNKYRNNFDHAPLLPQEQKA 263

  Fly   152 DYSEMDYLIYESDTEVDAKQELKS----DSENPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFI 212
            ...|..|...|......|...|.:    :::||.|               |.|||.........:
Human   264 HIREKAYKCNEHGQVFRASASLTNQVIHNADNPYK---------------CSECGKVFSCSSKLV 313

  Fly   213 LHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNE 277
            :|.:.|.|.|.:.|..|...|.:.:.|.:|.|.||||||:||..|.:.|...|...:|:|.||.|
Human   314 IHRRMHTGEKPYKCHECGKLFSSNSNLSQHQRIHTGEKPYKCHECDKVFRSSSKLAQHQRIHTGE 378

  Fly   278 RPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTH 326
            :|:.|.||:..|.....|..|..:|||||.:.|:.|.|:|||:::|..|
Human   379 KPYKCHECDKVFNQIAHLVRHQKIHTGEKPYSCNKCGKVFSRHSYLAEH 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 21/53 (40%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
ZNF528XP_006723481.1 KRAB 8..68 CDD:214630
KRAB 8..47 CDD:279668
C2H2 Zn finger 272..291 CDD:275368 3/18 (17%)
COG5048 277..712 CDD:227381 55/166 (33%)
C2H2 Zn finger 299..319 CDD:275368 5/19 (26%)
zf-H2C2_2 312..336 CDD:290200 7/23 (30%)
C2H2 Zn finger 327..347 CDD:275368 6/19 (32%)
zf-H2C2_2 339..364 CDD:290200 13/24 (54%)
C2H2 Zn finger 355..375 CDD:275368 6/19 (32%)
zf-H2C2_2 368..392 CDD:290200 10/23 (43%)
C2H2 Zn finger 383..403 CDD:275368 6/19 (32%)
zf-H2C2_2 395..420 CDD:290200 11/24 (46%)
C2H2 Zn finger 411..431 CDD:275368 8/17 (47%)
zf-H2C2_2 423..447 CDD:290200 2/5 (40%)
C2H2 Zn finger 439..459 CDD:275368
C2H2 Zn finger 467..487 CDD:275368
C2H2 Zn finger 495..515 CDD:275368
C2H2 Zn finger 523..543 CDD:275368
zf-H2C2_2 535..560 CDD:290200
C2H2 Zn finger 551..571 CDD:275368
zf-H2C2_2 563..588 CDD:290200
C2H2 Zn finger 579..599 CDD:275368
zf-H2C2_2 591..616 CDD:290200
C2H2 Zn finger 607..627 CDD:275368
zf-H2C2_2 619..642 CDD:290200
C2H2 Zn finger 635..655 CDD:275368
C2H2 Zn finger 663..683 CDD:275368
zf-H2C2_2 675..700 CDD:290200
C2H2 Zn finger 691..711 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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