DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ranshi and TT1

DIOPT Version :9

Sequence 1:	NP_649824.1	Gene:	ranshi / 41041	FlyBaseID:	FBgn0037620	Length:	346	Species:	Drosophila melanogaster
Sequence 2:	NP_174737.2	Gene:	TT1 / 840386	AraportID:	AT1G34790	Length:	303	Species:	Arabidopsis thaliana

Alignment Length:	306	Identity:	62/306 - (20%)
Similarity:	105/306 - (34%)	Gaps:	125/306 - (40%)

- Green bases have known domain annotations that are detailed below.

  Fly    78 HSQDDEDFLRICQES--------PKSVLEQEELELDLAEISIEVERLDDLNEGPIQS-SGFKVED 133
            |.|..:.|..:.|.|        |..::::..|..:|           |||..|:.: .|.:.|:
plant    21 HFQSLDLFPNLNQNSCINNTLIEPLPLIDRINLNSNL-----------DLNPNPLYAEEGEQEEE 74

  Fly   134 ILNESKINEDEPNNEDDIDY-----------SEMDYLIYESDTEV---DAKQELKSDSEN----- 179
                   .|:|.:.|.|:|.           ::...|...:..|:   ||.:.::::...
plant    75 -------EEEEEDREVDVDLHIGLPGFGKPSNDAKQLKKRNGKEIATYDAGKGIENELSGKAYWI 132

  Fly   180 --PKK------------------RRN-------------RRNPRDSNRT----------FFC-EE 200
              |::                  |.|             |:.|.....|          :.| |.
plant   133 PAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEG 197

  Fly   201 CGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFS--- 262
            |.|||..        .|.:.:|:|            ..|:.|.::..|.|||.||.|.:..:
plant   198 CRNHIDH--------PRSKPLKDF------------RTLQTHYKRKHGHKPFSCRLCGKLLAVKG 242

  Fly   263 DYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAF 308
            |:.|   ||: :..:| :|| .|.:.|.....||:|:      |||
plant   243 DWRT---HEK-NCGKR-WVC-VCGSDFKHKRSLKDHV------KAF 276

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ranshi	NP_649824.1	zf-AD	5..77	CDD:214871
		C2H2 Zn finger	198..218	CDD:275368	6/20 (30%)
		COG5048	222..>276	CDD:227381	15/56 (27%)
		C2H2 Zn finger	226..246	CDD:275368	2/19 (11%)
		zf-H2C2_2	238..262	CDD:290200	9/23 (39%)
		C2H2 Zn finger	254..274	CDD:275368	7/22 (32%)
		zf-H2C2_2	269..291	CDD:290200	7/21 (33%)
		C2H2 Zn finger	282..302	CDD:275368	6/19 (32%)
		zf-H2C2_2	295..319	CDD:290200	6/14 (43%)
		C2H2 Zn finger	310..328	CDD:275368
TT1	NP_174737.2	C2H2 Zn finger	231..247	CDD:275368	5/18 (28%)
TT1	NP_174737.2	C2H2 Zn finger	257..274	CDD:275368	6/23 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	62	1.000	Inparanoid score	I2531
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050