DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and DOT5

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_172787.1 Gene:DOT5 / 837889 AraportID:AT1G13290 Length:302 Species:Arabidopsis thaliana


Alignment Length:114 Identity:28/114 - (24%)
Similarity:46/114 - (40%) Gaps:42/114 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 FC--EECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCR-HCS 258
            :|  |.|.|:|..        .|.:.:|:|            ..|:.|.::..|.|||:|| .|.
plant   149 YCCAEGCKNNIDH--------PRSKPLKDF------------RTLQTHYKRKHGAKPFRCRKKCE 193

  Fly   259 RSFS---DYSTRLKHERTHTNERPFVCKE-----CNNAFTTSYILKNHM 299
            ::|:   |:.|   ||:.        |.:     |.:.|.....||:|:
plant   194 KTFAVRGDWRT---HEKN--------CGKLWFCVCGSDFKHKRSLKDHV 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 5/21 (24%)
COG5048 222..>276 CDD:227381 16/57 (28%)
C2H2 Zn finger 226..246 CDD:275368 2/19 (11%)
zf-H2C2_2 238..262 CDD:290200 9/24 (38%)
C2H2 Zn finger 254..274 CDD:275368 8/23 (35%)
zf-H2C2_2 269..291 CDD:290200 5/26 (19%)
C2H2 Zn finger 282..302 CDD:275368 6/23 (26%)
zf-H2C2_2 295..319 CDD:290200 3/5 (60%)
C2H2 Zn finger 310..328 CDD:275368
DOT5NP_172787.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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