DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ranshi and WIP3

DIOPT Version :9

Sequence 1:	NP_649824.1	Gene:	ranshi / 41041	FlyBaseID:	FBgn0037620	Length:	346	Species:	Drosophila melanogaster
Sequence 2:	NP_172306.1	Gene:	WIP3 / 837349	AraportID:	AT1G08290	Length:	337	Species:	Arabidopsis thaliana

Alignment Length:	252	Identity:	50/252 - (19%)
Similarity:	85/252 - (33%)	Gaps:	79/252 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly   136 NESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFCEE 200
            |.|:.::.:..|:||:...::.:..|...:..|.........:.|.||
plant    84 NNSQASDIKEENKDDVVTLQIGFPKYHRGSSEDGSDITFDHQKKPIKR----------------- 131

  Fly   201 CGNHIKDRISFILHCKRHRGVK------EFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSR 259
              ..|:|.:..:   |:.|.:|      :...|.|..||..|:..:.|:    |...|.|..||:
plant   132 --EIIEDGVVMM---KKRRKMKFDEEIIDSDVEVCGKRFWIPSPAQIHV----GPMQFACSICSK 187

  Fly   260 SFSDYSTRLKHERTHTNE------------RP--------FVCKE-CNN-----------AFTTS 292
            :|:.|:....|...|.:|            :|        :.|.| |.|           .|.|
plant   188 TFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRT- 251

  Fly   293 YILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNA------------HRRNMQ 337
              |:.|.....|.|.|.|..|.|..:......||.::..            |:|:::
plant   252 --LQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLK 306

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ranshi	NP_649824.1	zf-AD	5..77	CDD:214871
		C2H2 Zn finger	198..218	CDD:275368	3/19 (16%)
		COG5048	222..>276	CDD:227381	16/59 (27%)
		C2H2 Zn finger	226..246	CDD:275368	6/19 (32%)
		zf-H2C2_2	238..262	CDD:290200	6/23 (26%)
		C2H2 Zn finger	254..274	CDD:275368	6/19 (32%)
		zf-H2C2_2	269..291	CDD:290200	9/53 (17%)
		C2H2 Zn finger	282..302	CDD:275368	8/31 (26%)
		zf-H2C2_2	295..319	CDD:290200	8/23 (35%)
		C2H2 Zn finger	310..328	CDD:275368	5/17 (29%)
WIP3	NP_172306.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	62	1.000	Inparanoid score	I2531
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_120097
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.950