DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZKSCAN3

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001229823.1 Gene:ZKSCAN3 / 80317 HGNCID:13853 Length:538 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368
COG5048 222..>276 CDD:227381
C2H2 Zn finger 226..246 CDD:275368
zf-H2C2_2 238..262 CDD:290200
C2H2 Zn finger 254..274 CDD:275368
zf-H2C2_2 269..291 CDD:290200
C2H2 Zn finger 282..302 CDD:275368
zf-H2C2_2 295..319 CDD:290200
C2H2 Zn finger 310..328 CDD:275368
ZKSCAN3NP_001229823.1 SCAN 42..154 CDD:128708
SCAN 42..130 CDD:280241
KRAB 214..274 CDD:214630
KRAB 217..252 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..274
zf-C2H2 314..336 CDD:278523
C2H2 Zn finger 316..336 CDD:275368
zf-H2C2_2 329..351 CDD:290200
C2H2 Zn finger 344..364 CDD:275368
zf-H2C2_2 356..381 CDD:290200
COG5048 <368..515 CDD:227381
C2H2 Zn finger 372..392 CDD:275368
zf-H2C2_2 384..409 CDD:290200
C2H2 Zn finger 400..420 CDD:275368
zf-H2C2_2 412..437 CDD:290200
C2H2 Zn finger 428..448 CDD:275368
zf-C2H2 480..502 CDD:278523
C2H2 Zn finger 482..502 CDD:275368
zf-H2C2_2 495..519 CDD:290200
C2H2 Zn finger 510..530 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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