DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and Zfp266

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001075954.1 Gene:Zfp266 / 77519 MGIID:1924769 Length:604 Species:Mus musculus


Alignment Length:326 Identity:87/326 - (26%)
Similarity:132/326 - (40%) Gaps:62/326 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 CSTLPNRLC-----ASCQTC---------LQQAISFRERCLEVQRELLHSQDDEDFLRICQESPK 94
            |...|..:|     ..|:.|         |.|.:|            :|:::.....:||.:|  
Mouse   301 CLNNPMGMCTGEKFCDCKECWKAFTVSSHLTQYVS------------IHTEEKSKVCKICGKS-- 351

  Fly    95 SVLEQEELELDLAEISIEVERLDDLNEGPIQ----SSGFKVEDILNESKINEDEPNNEDDIDYSE 155
                    ..:.:.:|..|:..::  |.|..    ...||     |.|.:|:....:.....|..
Mouse   352 --------FANYSRLSAHVKTHNE--EKPFVCKECGKAFK-----NMSYLNDHVRIHTGIKSYKC 401

  Fly   156 MD----YLIYESDTE----------VDAKQELKSDSENPKKRRNRRNPRDSNRTFFCEECGNHIK 206
            |:    :|.:...||          .:.|:..|:.|.:.:...:.|. ....:.:.|:|||....
Mouse   402 MECGKAFLRWSGLTEHIRVHTGEKPYECKECGKTFSRSTQLTEHIRT-HTGIKPYECKECGKAFT 465

  Fly   207 DRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHE 271
            .......|.:.|.|.|.|.|:.|...|...:.|..|:|.|||||||:|.||.::|...|.|.||.
Mouse   466 QYSGLATHVRIHSGEKPFACKECGKAFTRTSGLIHHVRTHTGEKPFECVHCGKTFITSSHRTKHL 530

  Fly   272 RTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRRNM 336
            :.|:.|:||||..|..||..|..|..||..|||||.:.|..|.|.|:.|:.|..|.|.:...:..
Mouse   531 KIHSGEKPFVCNICGKAFIYSTSLNIHMRTHTGEKPYICKQCGKAFAVYSRLRKHSRVHTEEKPY 595

  Fly   337 Q 337
            |
Mouse   596 Q 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 8/46 (17%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 24/53 (45%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 13/23 (57%)
C2H2 Zn finger 254..274 CDD:275368 8/19 (42%)
zf-H2C2_2 269..291 CDD:290200 11/21 (52%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
zf-H2C2_2 295..319 CDD:290200 12/23 (52%)
C2H2 Zn finger 310..328 CDD:275368 7/17 (41%)
Zfp266NP_001075954.1 KRAB 41..97 CDD:214630
C2H2 Zn finger 265..281 CDD:275368
C2H2 Zn finger 289..309 CDD:275368 2/7 (29%)
C2H2 Zn finger 317..337 CDD:275368 5/31 (16%)
C2H2 Zn finger 345..365 CDD:275368 5/29 (17%)
zf-H2C2_2 357..382 CDD:372612 6/31 (19%)
C2H2 Zn finger 373..393 CDD:275368 5/24 (21%)
COG5048 <397..588 CDD:227381 64/191 (34%)
C2H2 Zn finger 401..421 CDD:275368 4/19 (21%)
C2H2 Zn finger 429..449 CDD:275368 4/20 (20%)
C2H2 Zn finger 457..477 CDD:275368 5/19 (26%)
C2H2 Zn finger 485..505 CDD:275368 6/19 (32%)
C2H2 Zn finger 513..533 CDD:275368 8/19 (42%)
C2H2 Zn finger 541..561 CDD:275368 8/19 (42%)
C2H2 Zn finger 569..589 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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