DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF85

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_011526565.1 Gene:ZNF85 / 7639 HGNCID:13160 Length:640 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368
COG5048 222..>276 CDD:227381
C2H2 Zn finger 226..246 CDD:275368
zf-H2C2_2 238..262 CDD:290200
C2H2 Zn finger 254..274 CDD:275368
zf-H2C2_2 269..291 CDD:290200
C2H2 Zn finger 282..302 CDD:275368
zf-H2C2_2 295..319 CDD:290200
C2H2 Zn finger 310..328 CDD:275368
ZNF85XP_011526565.1 KRAB 4..64 CDD:214630
KRAB 4..43 CDD:279668
COG5048 189..603 CDD:227381
C2H2 Zn finger 221..241 CDD:275368
C2H2 Zn finger 249..269 CDD:275368
zf-H2C2_2 262..286 CDD:290200
C2H2 Zn finger 277..297 CDD:275368
zf-H2C2_2 289..314 CDD:290200
C2H2 Zn finger 305..325 CDD:275368
zf-H2C2_2 318..342 CDD:290200
C2H2 Zn finger 333..353 CDD:275368
zf-H2C2_2 346..370 CDD:290200
C2H2 Zn finger 361..381 CDD:275368
zf-H2C2_2 373..398 CDD:290200
C2H2 Zn finger 389..409 CDD:275368
zf-H2C2_2 401..426 CDD:290200
C2H2 Zn finger 417..437 CDD:275368
zf-H2C2_2 429..454 CDD:290200
C2H2 Zn finger 445..465 CDD:275368
zf-H2C2_2 458..482 CDD:290200
C2H2 Zn finger 473..493 CDD:275368
zf-H2C2_2 486..510 CDD:290200
C2H2 Zn finger 501..521 CDD:275368
zf-H2C2_2 513..537 CDD:290200
C2H2 Zn finger 529..549 CDD:275368
zf-H2C2_2 542..566 CDD:290200
C2H2 Zn finger 557..577 CDD:275368
zf-H2C2_2 570..594 CDD:290200
C2H2 Zn finger 585..605 CDD:275368
zf-H2C2_2 597..621 CDD:290200
C2H2 Zn finger 613..633 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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