DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and Zfp758

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_006228150.1 Gene:Zfp758 / 690559 RGDID:1594701 Length:659 Species:Rattus norvegicus


Alignment Length:348 Identity:92/348 - (26%)
Similarity:145/348 - (41%) Gaps:58/348 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGKR-----TNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISF 65
            |..|.:|     ...|...|:|...|...              |....|.|....|..:.|.::.
  Rat    29 CLDCAQRALYMDVMLENYNNLFYVGNHCM--------------CHKYENILDQGIQHIVPQHVNI 79

  Fly    66 R---ERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPIQSS 127
            :   ::|.|             |.....||.:|:..:..|. |.::.|:.:.|.:..|    ...
  Rat    80 QVKSDKCYE-------------FGNTIHESTQSIPYKTNLR-DTSDTSLNLSRHEPRN----NRE 126

  Fly   128 GFKVEDILN------ESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQ-----ELKSDSENPK 181
            ..|.::.:|      ...:.::....:.:.:.:|:|...| |..::..||     :|...||..|
  Rat   127 PCKCKNCVNCLSSCSTVSLTQEIHRGKKESNGTELDKDFY-SKQKLMLKQTKWGKKLYKCSECAK 190

  Fly   182 ---KR---RNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELK 240
               |:   |..:......:.:.|.||..|...:.:.|:|.:.|.|.|.:.|..||..|....:|:
  Rat   191 CFAKKCWFRKHQTIHTGEKIYKCRECDKHFTQKRNLIIHQRCHGGKKPYKCSECEKCFIQVGDLR 255

  Fly   241 RHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGE 305
            ||.|.||||||:||..|.:.||..|:...|:..||.|:|:.|.||:..||....|..|..:||||
  Rat   256 RHQRIHTGEKPYKCSECDKCFSYKSSLRSHQIIHTGEKPYKCNECDKCFTHKGSLSIHQRIHTGE 320

  Fly   306 KAFRCDLCDKLFSRYTHLTTHYR 328
            |.::|..|||.|::...|.||.|
  Rat   321 KPYKCHECDKCFTQKGSLITHQR 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 14/78 (18%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 23/53 (43%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
zf-H2C2_2 238..262 CDD:290200 13/23 (57%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
zf-H2C2_2 269..291 CDD:290200 9/21 (43%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 12/23 (52%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
Zfp758XP_006228150.1 KRAB 13..>55 CDD:214630 6/25 (24%)
KRAB 13..52 CDD:279668 6/22 (27%)
C2H2 Zn finger 185..205 CDD:275368 5/19 (26%)
COG5048 209..634 CDD:227381 55/135 (41%)
C2H2 Zn finger 213..233 CDD:275368 6/19 (32%)
C2H2 Zn finger 241..261 CDD:275368 8/19 (42%)
zf-H2C2_2 253..278 CDD:290200 14/24 (58%)
C2H2 Zn finger 269..289 CDD:275368 6/19 (32%)
zf-H2C2_2 281..306 CDD:290200 9/24 (38%)
C2H2 Zn finger 297..317 CDD:275368 7/19 (37%)
zf-H2C2_2 309..334 CDD:290200 12/24 (50%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
C2H2 Zn finger 353..373 CDD:275368
C2H2 Zn finger 381..401 CDD:275368
C2H2 Zn finger 409..429 CDD:275368
C2H2 Zn finger 437..457 CDD:275368
zf-H2C2_2 449..474 CDD:290200
C2H2 Zn finger 465..485 CDD:275368
C2H2 Zn finger 493..513 CDD:275368
C2H2 Zn finger 521..541 CDD:275368
C2H2 Zn finger 549..569 CDD:275368
zf-H2C2_2 562..586 CDD:290200
C2H2 Zn finger 577..597 CDD:275368
zf-H2C2_2 589..614 CDD:290200
C2H2 Zn finger 605..625 CDD:275368
zf-H2C2_2 617..642 CDD:290200
C2H2 Zn finger 633..653 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11351
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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