DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF492

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_065906.1 Gene:ZNF492 / 57615 HGNCID:23707 Length:531 Species:Homo sapiens


Alignment Length:278 Identity:81/278 - (29%)
Similarity:128/278 - (46%) Gaps:29/278 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 CLQQAISFRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEV-ERLDDLNE 121
            |..:.:..|:.|..:....:|.:        |.......|...:.::...:..::| .:..:.|.
Human    74 CGCENLQLRKYCKSMDECKVHKE--------CYNGLNQCLTTTQNKIFQCDKYVKVFHKFSNSNR 130

  Fly   122 GPIQSSGFKVEDILNESKINEDEPNNEDDIDYSEMDYL-----IYESDTEVDAKQELKSDSENPK 181
            ..|:.:|.|      ..|..|.|.:      :..:.:|     |:..:.....|:..|:.:|...
Human   131 HTIRHTGKK------SFKCKECEKS------FCMLSHLAQHKRIHSGEKPYKCKECGKAYNETSN 183

  Fly   182 KRRNRRNPRDSNRTFFCEECGNHIKDRISFI-LHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRK 245
            ...::| .....:.:.|||||... :|:|.: .|...|.|.|.:.||.|...|...|.|..|.|.
Human   184 LSTHKR-IHTGKKPYKCEECGKAF-NRLSHLTTHKIIHTGKKPYKCEECGKAFNQSANLTTHKRI 246

  Fly   246 HTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRC 310
            ||||||:||..|.|:||..||...|:..|..|:|:.|:||..||:.|..|..|.::|||||.::|
Human   247 HTGEKPYKCEECGRAFSQSSTLTAHKIIHAGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKFYKC 311

  Fly   311 DLCDKLFSRYTHLTTHYR 328
            :.|.|.||:.:|||||.|
Human   312 EECGKAFSQLSHLTTHKR 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 3/18 (17%)
C2H2 Zn finger 198..218 CDD:275368 8/20 (40%)
COG5048 222..>276 CDD:227381 25/53 (47%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
zf-H2C2_2 238..262 CDD:290200 13/23 (57%)
C2H2 Zn finger 254..274 CDD:275368 8/19 (42%)
zf-H2C2_2 269..291 CDD:290200 9/21 (43%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 10/17 (59%)
ZNF492NP_065906.1 KRAB <1..32 CDD:214630
COG5048 138..522 CDD:227381 71/206 (34%)
C2H2 Zn finger 143..163 CDD:275368 3/25 (12%)
zf-H2C2_2 155..179 CDD:290200 4/23 (17%)
C2H2 Zn finger 171..191 CDD:275368 4/20 (20%)
zf-H2C2_2 183..208 CDD:290200 6/26 (23%)
C2H2 Zn finger 199..219 CDD:275368 8/20 (40%)
zf-H2C2_2 211..236 CDD:290200 8/24 (33%)
C2H2 Zn finger 227..247 CDD:275368 8/19 (42%)
zf-H2C2_2 239..264 CDD:290200 14/24 (58%)
C2H2 Zn finger 255..275 CDD:275368 8/19 (42%)
C2H2 Zn finger 283..303 CDD:275368 8/19 (42%)
C2H2 Zn finger 311..331 CDD:275368 11/19 (58%)
zf-H2C2_2 323..348 CDD:290200 6/7 (86%)
C2H2 Zn finger 339..359 CDD:275368
C2H2 Zn finger 367..387 CDD:275368
zf-H2C2_2 379..403 CDD:290200
C2H2 Zn finger 395..415 CDD:275368
zf-H2C2_2 408..432 CDD:290200
C2H2 Zn finger 423..443 CDD:275368
C2H2 Zn finger 451..471 CDD:275368
zf-H2C2_2 463..488 CDD:290200
C2H2 Zn finger 479..499 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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