DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and zbtb48

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_696166.2 Gene:zbtb48 / 567773 ZFINID:ZDB-GENE-030131-4450 Length:760 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368
COG5048 222..>276 CDD:227381
C2H2 Zn finger 226..246 CDD:275368
zf-H2C2_2 238..262 CDD:290200
C2H2 Zn finger 254..274 CDD:275368
zf-H2C2_2 269..291 CDD:290200
C2H2 Zn finger 282..302 CDD:275368
zf-H2C2_2 295..319 CDD:290200
C2H2 Zn finger 310..328 CDD:275368
zbtb48XP_696166.2 BTB 18..109 CDD:279045
BTB 35..116 CDD:197585
C2H2 Zn finger 324..344 CDD:275368
zf-H2C2_2 336..359 CDD:290200
C2H2 Zn finger 352..403 CDD:275368
C2H2 Zn finger 383..402 CDD:275368
C2H2 Zn finger 411..432 CDD:275368
C2H2 Zn finger 440..461 CDD:275368
C2H2 Zn finger 469..490 CDD:275368
COG5048 <495..643 CDD:227381
C2H2 Zn finger 498..518 CDD:275368
zf-H2C2_2 510..535 CDD:290200
C2H2 Zn finger 526..546 CDD:275368
zf-H2C2_2 538..562 CDD:290200
C2H2 Zn finger 554..571 CDD:275368
C2H2 Zn finger 586..603 CDD:275368
zf-H2C2_2 596..620 CDD:290200
C2H2 Zn finger 611..631 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I10558
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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