DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZSCAN32

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001271456.1 Gene:ZSCAN32 / 54925 HGNCID:20812 Length:697 Species:Homo sapiens


Alignment Length:440 Identity:92/440 - (20%)
Similarity:158/440 - (35%) Gaps:140/440 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AERSLNIFEKRNQTTLEHIKLLTG------------AVLKNCSTLPNRLCASCQTCLQQAISFRE 67
            |:|:|  :....|....|:.|.||            |:|.:     ::.....|||.|.:     
Human   232 AQRAL--YRGATQRKDSHVSLATGVPWGYEETKTLLAILSS-----SQFYGKLQTCQQNS----- 284

  Fly    68 RCLEVQRELLHSQDDEDFLRI---CQESPKS---------------------------------- 95
               ::.|.:.....::.|||.   |:...||                                  
Human   285 ---QIYRAMAEGLWEQGFLRTPEQCRTKFKSLQLSYRKVRRGRVPEPCIFYEEMNALSGSWASAP 346

  Fly    96 ------VLEQEELELDLAEISIEVERLDDLNEGPIQSSGFKVEDILN------------------ 136
                  |..||..:::..|::.:.....::.:|.:..:....:|..|                  
Human   347 PMASDAVPGQEGSDIEAGELNHQNGEPTEVEDGTVDGADRDEKDFRNPGQEVRKLDLPVLFPNRL 411

  Fly   137 --ESKINEDEPNN--EDDIDYSEMDYLIYESDTEVDAKQELKS--DSENPKKRRNRRNPRD---- 191
              |.| ||.:..|  .||.:..|::..:......|....||:.  :||...:|:.|.:|.:    
Human   412 GFEFK-NEIKKENLKWDDSEEVEINKALQRKSRGVYWHSELQKGLESEPTSRRQCRNSPGESEEK 475

  Fly   192 -------SNRTFF----------------------------------CEECGNHIKDRISFILHC 215
                   |:::|.                                  |.|||.........:.|.
Human   476 TPSQEKMSHQSFCARDKACTHILCGKNCSQSVHSPHKPALKLEKVSQCPECGKTFSRSSYLVRHQ 540

  Fly   216 KRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPF 280
            :.|.|.|...|..|...|...:.|..|:|.||||:|::|..|.:||:..|:.:.|:||||.|:|:
Human   541 RIHTGEKPHKCSECGKGFSERSNLTAHLRTHTGERPYQCGQCGKSFNQSSSLIVHQRTHTGEKPY 605

  Fly   281 VCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSN 330
            .|..|...|..|.....|..:||||..::|.:|.|:|:..:|.:.|.:::
Human   606 QCIVCGKRFNNSSQFSAHRRIHTGESPYKCAVCGKIFNNSSHFSAHRKTH 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 15/73 (21%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 21/53 (40%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 11/23 (48%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 5/19 (26%)
zf-H2C2_2 295..319 CDD:290200 9/23 (39%)
C2H2 Zn finger 310..328 CDD:275368 6/17 (35%)
ZSCAN32NP_001271456.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
SCAN 33..142 CDD:128708
SCAN 33..121 CDD:280241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..177
KRAB_A-box 218..250 CDD:295379 5/19 (26%)
Myb_DNA-bind_4 253..334 CDD:290549 14/93 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..395 7/47 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 451..482 6/30 (20%)
COG5048 <455..668 CDD:227381 53/201 (26%)
zf-C2H2 522..543 CDD:278523 5/20 (25%)
C2H2 Zn finger 523..543 CDD:275368 5/19 (26%)
zf-H2C2_2 535..559 CDD:290200 6/23 (26%)
C2H2 Zn finger 551..571 CDD:275368 6/19 (32%)
zf-H2C2_2 563..588 CDD:290200 12/24 (50%)
C2H2 Zn finger 579..599 CDD:275368 7/19 (37%)
zf-H2C2_2 591..616 CDD:290200 10/24 (42%)
C2H2 Zn finger 607..627 CDD:275368 5/19 (26%)
zf-H2C2_2 623..644 CDD:290200 9/20 (45%)
C2H2 Zn finger 635..655 CDD:275368 6/19 (32%)
zf-H2C2_2 647..671 CDD:290200 2/9 (22%)
zf-C2H2 661..683 CDD:278523
C2H2 Zn finger 663..683 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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