DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and Zfp51

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_006228071.2 Gene:Zfp51 / 499056 RGDID:1560046 Length:779 Species:Rattus norvegicus


Alignment Length:373 Identity:99/373 - (26%)
Similarity:155/373 - (41%) Gaps:88/373 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGK---RTNAERS---LNIFEK------------RNQTTLEHIKLLTGAVLKNCSTLPNRLC 52
            |:.|||   :|:..:|   ::..||            .:.:...|.|:.|..  ::||      |
  Rat   304 CKECGKSFRQTSVLKSHQKMHTGEKPYKCKQCDKSFAHSSSFRTHQKIHTSE--EHCS------C 360

  Fly    53 ASCQTCLQQAISFRE-----------RCLEVQRELLHSQDDEDFLRICQE--SPKSVLEQEELEL 104
            ..|.....|...||:           :|.|..|...|...    ||..|:  ||:...|.:|...
  Rat   361 PECGREFHQLSHFRKHYRLHTGEKPYKCNECGRSFTHYAS----LRWHQKTHSPEIYYECKECGK 421

  Fly   105 DLAEISIEVERLDDLNEGPIQSSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDA 169
            ...|:| .::|...::.|                    ::|...:..|.|      :..::.:..
  Rat   422 SFIELS-HLKRHYRIHTG--------------------EKPYKCEVCDKS------FTVNSTLKT 459

  Fly   170 KQELKSDSENPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFC 234
            .|::.: .|.|.|               |.||............|...|.|.:.:.|:.|:..|.
  Rat   460 HQKIHT-GEKPYK---------------CRECDKSFTHNSHLRRHQSVHTGERPYKCKDCDKSFT 508

  Fly   235 TPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHM 299
            ..:.||.|.:.|||||.:||..||:|||.:|....|.|.||.|||:|||||..:|||...|:.|.
  Rat   509 ECSTLKEHQKLHTGEKTYKCGECSKSFSQHSYLRSHLRVHTGERPYVCKECGKSFTTCSTLRTHQ 573

  Fly   300 LVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRR--NMQKADTIFDK 345
            .:|||||.::|..|:|.|::.:||.||:|.:...|  :.::.|..|.:
  Rat   574 KIHTGEKPYKCRECNKSFTQDSHLRTHHRVHTGERPYSCKECDRSFTR 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 21/99 (21%)
C2H2 Zn finger 198..218 CDD:275368 4/19 (21%)
COG5048 222..>276 CDD:227381 22/53 (42%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 13/23 (57%)
C2H2 Zn finger 254..274 CDD:275368 9/19 (47%)
zf-H2C2_2 269..291 CDD:290200 13/21 (62%)
C2H2 Zn finger 282..302 CDD:275368 9/19 (47%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
Zfp51XP_006228071.2 KRAB 73..113 CDD:396083
COG5048 231..647 CDD:227381 99/373 (27%)
C2H2 Zn finger 248..268 CDD:275368
C2H2 Zn finger 276..296 CDD:275368
C2H2 Zn finger 304..324 CDD:275368 6/19 (32%)
C2H2 Zn finger 332..352 CDD:275368 2/19 (11%)
C2H2 Zn finger 360..380 CDD:275368 5/19 (26%)
C2H2 Zn finger 416..436 CDD:275368 4/20 (20%)
C2H2 Zn finger 444..464 CDD:275368 3/25 (12%)
C2H2 Zn finger 472..492 CDD:275368 4/19 (21%)
C2H2 Zn finger 500..520 CDD:275368 6/19 (32%)
C2H2 Zn finger 528..548 CDD:275368 9/19 (47%)
C2H2 Zn finger 556..576 CDD:275368 9/19 (47%)
C2H2 Zn finger 584..604 CDD:275368 9/19 (47%)
C2H2 Zn finger 612..632 CDD:275368 2/10 (20%)
C2H2 Zn finger 640..660 CDD:275368
C2H2 Zn finger 668..688 CDD:275368
zf-H2C2_2 680..705 CDD:404364
C2H2 Zn finger 696..715 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11351
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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