DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF724

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001342333.1 Gene:ZNF724 / 440519 HGNCID:32460 Length:619 Species:Homo sapiens


Alignment Length:318 Identity:81/318 - (25%)
Similarity:127/318 - (39%) Gaps:80/318 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISFRERCLEVQ 73
            |||..|...:|: ..||..|..:|.|                    |:.|   .|:|.:......
Human   203 CGKAFNVSSTLS-QHKRIHTGQKHYK--------------------CEEC---GIAFNKSSHLNT 243

  Fly    74 RELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPIQSSGFKVEDILNES 138
            .:::|:.:            ||...:|                        ....|.:...|...
Human   244 HKIIHTGE------------KSYKREE------------------------CGKAFNISSHLTTH 272

  Fly   139 KINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFCEECGN 203
            ||                   |:..:.....|:..|:.:::....|: :......:.:.||.||.
Human   273 KI-------------------IHTGENAYKCKECGKAFNQSSTLTRH-KIIHAGEKPYICEHCGR 317

  Fly   204 HIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRL 268
            ......:...|.:.|.|.|.:.||.|...|...:.|.:|.|.||||||:||..|.::|:..||..
Human   318 AFNQSSNLTKHKRIHTGDKPYKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGKAFNVSSTLT 382

  Fly   269 KHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTH 326
            :|:|.||.|:|:.|:||..||.||..|..|..:|||||.::|:.|.|.|::::.||||
Human   383 QHKRIHTGEKPYKCEECGKAFNTSSHLTTHKRIHTGEKPYKCEECGKAFNQFSQLTTH 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 14/67 (21%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 23/53 (43%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 11/21 (52%)
C2H2 Zn finger 282..302 CDD:275368 9/19 (47%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
ZNF724NP_001342333.1 KRAB 4..64 CDD:214630
COG5048 143..526 CDD:227381 81/318 (25%)
C2H2 Zn finger 172..192 CDD:275368
C2H2 Zn finger 201..220 CDD:275368 7/17 (41%)
C2H2 Zn finger 228..248 CDD:275368 4/22 (18%)
C2H2 Zn finger 257..276 CDD:275368 5/61 (8%)
C2H2 Zn finger 284..304 CDD:275368 3/20 (15%)
C2H2 Zn finger 312..332 CDD:275368 5/19 (26%)
C2H2 Zn finger 340..360 CDD:275368 7/19 (37%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
C2H2 Zn finger 396..416 CDD:275368 9/19 (47%)
C2H2 Zn finger 424..444 CDD:275368 8/17 (47%)
C2H2 Zn finger 452..472 CDD:275368
C2H2 Zn finger 480..500 CDD:275368
C2H2 Zn finger 508..528 CDD:275368
SFP1 <530..610 CDD:227516
C2H2 Zn finger 536..556 CDD:275368
zf-H2C2_2 548..572 CDD:316026
C2H2 Zn finger 564..584 CDD:275368
C2H2 Zn finger 592..612 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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