DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and CG31365

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_732827.1 Gene:CG31365 / 42736 FlyBaseID:FBgn0051365 Length:639 Species:Drosophila melanogaster


Alignment Length:582 Identity:109/582 - (18%)
Similarity:175/582 - (30%) Gaps:263/582 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VCRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVL--KNCSTLPNRLCASCQTCLQQAISFRE 67
            :||.|.|  ..:.:..||::.:......::|:....|  |...|||.|:|..|:..|:::..||:
  Fly    13 LCRLCLK--EHQDAYAIFDEDDTQLSIPVRLMACVALDAKATDTLPKRICQECRYQLEKSFLFRQ 75

  Fly    68 RC-------------------------------------------LEVQRELLHSQDD---EDF- 85
            ||                                           :|||.::...:|:   ||| 
  Fly    76 RCQWAEKKLRKHIRLLGLGKRSRVFSKDPDDYDEDELEFEDSIAFIEVQDKVRKLEDEKWREDFK 140

  Fly    86 -------------------LRICQESPKSVLEQ--EELELDLAEISIEVERLDDL-NE------- 121
                               .::..|..|.:.|:  .|:..:||| .:..:..||| ||       
  Fly   141 EEQAAEMHKRLVKSRLELRAKLTTELRKELAEEVRSEVRKELAE-EVRSQVRDDLRNEVSEDIRK 204

  Fly   122 ----------------------------------------GPIQS--------------SGFKVE 132
                                                    .|.:|              :..|..
  Fly   205 EQLAMLLGELEVYLTEKKAGRWESLDGSEPETKPQVKEDASPSRSKTKALPKRRPSLVDANLKAT 269

  Fly   133 DILNESK-------INEDEPNNED-DIDYSEMD-----------------------------YLI 160
            :...::|       .|.|..||.| :||..|:|                             |:|
  Fly   270 EARKDAKEEEFILGCNTDPANNSDVNIDGLELDEEVPAESGEDFREINMVGSDVVHTDNGEIYII 334

  Fly   161 ---------------YESDT---------------------------------EVDAKQELKS-- 175
                           ::.|.                                 |:..:|::.|  
  Fly   335 NSASSEDQNQDSTPEFDQDNGITSYNIKEDGEIQFSGEKPEEIEDVVVFNLGEEISQEQQVFSFH 399

  Fly   176 -------------DSENPKKRRNRR-----------NPR-----DSNRTFFCEECGNHIKDRISF 211
                         |.:.|.||:...           .|:     |:.::|.|..|......:...
  Fly   400 ENVIIVEKEQNDRDEQTPLKRKRSSELVFKQESSCPQPKTGRITDTVKSFQCHLCPVAFPTQKLL 464

  Fly   212 ILHCKRH-RGVKE-----FGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKH 270
            ..|...| :|:|.     ..|..|..:....:.||||:..|||.|||||..|..|||......:|
  Fly   465 TRHHNTHIKGLKSGKGGTLKCPSCALQLSCASSLKRHMIIHTGLKPFKCSECELSFSQREVLKRH 529

  Fly   271 ERTHTNERPFVCKECNNAFTTSYILKNHM-LVHTG-EKAFRCDLCDKLFSRYT----HLTTH 326
            ..|||..:...|.:|::.|.....|:.|: .||.| .:..:|.||.:.|:..:    ||.||
  Fly   530 MDTHTGVKRHQCPQCSSCFAQKSNLQQHIGRVHMGNSRTHKCHLCHRSFNHVSGLSRHLVTH 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 23/116 (20%)
C2H2 Zn finger 198..218 CDD:275368 3/19 (16%)
COG5048 222..>276 CDD:227381 22/58 (38%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 14/23 (61%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
zf-H2C2_2 269..291 CDD:290200 7/21 (33%)
C2H2 Zn finger 282..302 CDD:275368 5/20 (25%)
zf-H2C2_2 295..319 CDD:290200 9/25 (36%)
C2H2 Zn finger 310..328 CDD:275368 8/21 (38%)
CG31365NP_732827.1 zf-AD 13..86 CDD:214871 20/74 (27%)
vATP-synt_E 109..>244 CDD:304907 19/135 (14%)
RRF <161..222 CDD:294170 12/61 (20%)
zf-C2H2_8 454..530 CDD:292531 23/75 (31%)
C2H2 Zn finger 485..505 CDD:275368 6/19 (32%)
zf-H2C2_2 497..522 CDD:290200 15/24 (63%)
C2H2 Zn finger 513..533 CDD:275368 6/19 (32%)
zf-H2C2_2 526..550 CDD:290200 7/23 (30%)
C2H2 Zn finger 541..562 CDD:275368 5/20 (25%)
C2H2 Zn finger 571..591 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..617 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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