DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and CG14711

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_650094.1 Gene:CG14711 / 41395 FlyBaseID:FBgn0037922 Length:377 Species:Drosophila melanogaster


Alignment Length:373 Identity:118/373 - (31%)
Similarity:185/373 - (49%) Gaps:47/373 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EGKVCRTC-GKRTNAERSLNIFEKRNQTTLEHIKLL--TGAV-LKNCSTLPNRLCASCQTCLQQA 62
            |..:||.| .:..|:|....:|:..:....|.::.:  .|:: |.....:|:.||.||...|..|
  Fly     3 EYMLCRICLTEDINSEAMAPLFDDNDAQCRELVRKIEEVGSIKLVPLQNIPSMLCYSCVERLTSA 67

  Fly    63 ISFRERCLEVQREL--------LHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDL 119
            ..|||.|.|.:|..        :.|:..::...:..::.:.:.|.....:|..|..|.:|   ::
  Fly    68 HKFRELCQESERTFATNVVKAEMKSEPTDEVPHVVADNIEYIYESANDFIDGVEDDIGME---NI 129

  Fly   120 NEGPIQ------SSGFKVEDILNESKINEDE---PNNEDDIDYSEMDYLIYESDTEVDAKQELK- 174
            .|.|::      |..::...::::  ::||:   ||:.|. ||..::..   ...:|...:..| 
  Fly   130 MEEPLEDGVGETSQAYETSTVVDD--LDEDDLLVPNSTDS-DYQPIERC---RKAKVRKTRMTKR 188

  Fly   175 ----------------SDSENPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKE 223
                            |:...|.:...:.:|..|:....||.|||....|.:..:|.:||...|.
  Fly   189 GRGRPRGASSGHPRSFSEERPPVQASFKSSPEVSSTNIMCEICGNIYSKRAALNIHMRRHMAEKP 253

  Fly   224 FGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNA 288
            |.||.|...|..|:||.||||.|||||||.|::|:|||:|.|:.::|||||||||||.|..|..|
  Fly   254 FKCEICSKSFAGPSELNRHIRVHTGEKPFLCKYCNRSFADRSSNIRHERTHTNERPFTCSTCGKA 318

  Fly   289 FTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRRNM 336
            |:.|.:||||||.|||||.|.|.:|:|.|||...|..|..:..|::.:
  Fly   319 FSYSNVLKNHMLTHTGEKPFLCRVCNKTFSRKHQLDQHLGTMTHQQTV 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 22/83 (27%)
C2H2 Zn finger 198..218 CDD:275368 7/19 (37%)
COG5048 222..>276 CDD:227381 32/53 (60%)
C2H2 Zn finger 226..246 CDD:275368 11/19 (58%)
zf-H2C2_2 238..262 CDD:290200 17/23 (74%)
C2H2 Zn finger 254..274 CDD:275368 10/19 (53%)
zf-H2C2_2 269..291 CDD:290200 15/21 (71%)
C2H2 Zn finger 282..302 CDD:275368 11/19 (58%)
zf-H2C2_2 295..319 CDD:290200 16/23 (70%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
CG14711NP_650094.1 zf-AD 6..81 CDD:285071 22/74 (30%)
C2H2 Zn finger 228..248 CDD:275368 7/19 (37%)
zf-H2C2_2 240..264 CDD:290200 8/23 (35%)
COG5048 249..>362 CDD:227381 63/112 (56%)
C2H2 Zn finger 256..276 CDD:275368 11/19 (58%)
zf-H2C2_2 268..292 CDD:290200 17/23 (74%)
C2H2 Zn finger 284..304 CDD:275368 10/19 (53%)
zf-H2C2_2 299..321 CDD:290200 15/21 (71%)
C2H2 Zn finger 312..332 CDD:275368 11/19 (58%)
zf-H2C2_2 325..349 CDD:290200 16/23 (70%)
C2H2 Zn finger 340..362 CDD:275368 8/21 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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