DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and CG14667

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001014607.1 Gene:CG14667 / 40643 FlyBaseID:FBgn0037317 Length:337 Species:Drosophila melanogaster


Alignment Length:352 Identity:101/352 - (28%)
Similarity:155/352 - (44%) Gaps:38/352 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VCRTC-GKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISFRER 68
            |||.| .|....:|..|||.......|..:||:||..|.....||..:|..|.:.|..|..||||
  Fly     6 VCRICANKIMGHQRDRNIFIHMRGKYLGQLKLITGVELTRNQGLPEIVCERCFSELDLATKFRER 70

  Fly    69 CLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERL----DDLNEGPIQSSGF 129
            |:..|:.||      |.::  :.|.:|.:..|.....|.|..|:.::|    ||  :..:...|.
  Fly    71 CIFSQKYLL------DIIK--KTSDQSTVHVELSSEPLDEQLIDADQLETHYDD--DQYVCYQGT 125

  Fly   130 KVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQEL-KSDSENPKKRRNRRNPRDSN 193
            |.|        ::|....|.|.|.|.......|:..|...:::| :.:.|...|||        :
  Fly   126 KEE--------HQDLEEIELDDDPSAAVIAAAEAAAEAAQQEDLQEQEMERAAKRR--------S 174

  Fly   194 RTFFCEECGNHIKDRISFILHCKRHRGVKE----FGCEFCEDRFCTPAELKRH-IRKHTGEKPFK 253
            ..|.|:|||....|...:..|...|:..::    |.|..|...|...|.||:| .:.|...:.|:
  Fly   175 NFFICDECGTLFHDAFLYTEHLNGHQNRRDMNQFFPCPECPQTFNKKALLKQHRTQVHLINRRFQ 239

  Fly   254 CRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGE-KAFRCDLCDKLF 317
            |..|..:|:....:|:|::.|.||||:.|.||...|::...|:||...|:.: :.|||:.|:..|
  Fly   240 CTICHEAFASLGAKLRHDKAHKNERPYPCLECGMIFSSVSELQNHFSTHSKQIRKFRCEPCNMDF 304

  Fly   318 SRYTHLTTHYRSNAHRRNMQKADTIFD 344
            .....|..|.::..|:|..:.....||
  Fly   305 ITRRGLVAHTKTAPHKRLAKYMQDEFD 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 27/72 (38%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 16/58 (28%)
C2H2 Zn finger 226..246 CDD:275368 7/20 (35%)
zf-H2C2_2 238..262 CDD:290200 7/24 (29%)
C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 9/24 (38%)
C2H2 Zn finger 310..328 CDD:275368 5/17 (29%)
CG14667NP_001014607.1 zf-AD 6..80 CDD:214871 29/79 (37%)
C2H2 Zn finger 179..199 CDD:275368 6/19 (32%)
C2H2 Zn finger 211..232 CDD:275368 7/20 (35%)
C2H2 Zn finger 240..260 CDD:275368 5/19 (26%)
zf-C2H2_8 243..313 CDD:292531 23/69 (33%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 297..316 CDD:275368 5/18 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I19075
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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