DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and znf131

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_956799.2 Gene:znf131 / 393477 ZFINID:ZDB-GENE-040426-1563 Length:558 Species:Danio rerio


Alignment Length:305 Identity:78/305 - (25%)
Similarity:124/305 - (40%) Gaps:79/305 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ICQESPKSVLEQEELELDLAEISIEVE-----RLDDLNEG-PIQSSGFK----VEDILNE----- 137
            |.:..|.:..|..|:|:::.|..||||     .:.|:..| .:.||...    :.||.::     
Zfish   150 ITESLPSADTEAVEIEVEVGEEHIEVEESGLVEVVDVARGTTVPSSDDSALALLADITSKYQQGE 214

  Fly   138 ------SKINEDEPNNED--------------DIDYSEMDYLIYESDTEVD--------AKQELK 174
                  .|::|.....|:              ::..|::|.| :..| :.|        .||.:|
Zfish   215 QTLHVIKKVDETVVVQEEAVVASKTLENIEVVEVQISQLDNL-FRCD-KCDRCFKLYYHLKQHMK 277

  Fly   175 SDSENPKKRRNRRNPRDSNRTFFCEECG----------NHIKDRISFILHCKRHRGVKEFGCEFC 229
            :...:|:            |.|.|..||          .|:.:.........|.:..|...||:|
Zfish   278 THIASPE------------RGFVCRHCGKAYAREGALKQHLNNYHFDAEEQSRRQKKKVHVCEYC 330

  Fly   230 EDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTN--------ERPFVCKECN 286
            |.:|......|.|:|||||||||:|..|...|:..||...|.....|        ::.:.|:.|:
Zfish   331 EKQFDHFGHFKEHLRKHTGEKPFECPECHERFARNSTLKCHMSACQNGSGAKKGRKKLYECQVCS 395

  Fly   287 NAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSR----YTHLTTHY 327
            :.|.:....|:|::.|||||...|.|||..|:.    :|||..|:
Zfish   396 SVFNSWEQFKDHLVTHTGEKPNHCTLCDLWFTSPRDLHTHLQEHH 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 4/29 (14%)
COG5048 222..>276 CDD:227381 23/53 (43%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
zf-H2C2_2 238..262 CDD:290200 13/23 (57%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
zf-H2C2_2 269..291 CDD:290200 5/29 (17%)
C2H2 Zn finger 282..302 CDD:275368 5/19 (26%)
zf-H2C2_2 295..319 CDD:290200 12/23 (52%)
C2H2 Zn finger 310..328 CDD:275368 9/22 (41%)
znf131NP_956799.2 BTB 24..120 CDD:306997
zf-C2H2 257..279 CDD:306579 5/22 (23%)
C2H2 Zn finger 259..279 CDD:275368 5/20 (25%)
C2H2 Zn finger 289..347 CDD:275368 14/57 (25%)
COG5048 <310..441 CDD:227381 44/131 (34%)
C2H2 Zn finger 327..344 CDD:275368 6/16 (38%)
zf-H2C2_2 339..364 CDD:316026 14/24 (58%)
C2H2 Zn finger 355..372 CDD:275368 5/16 (31%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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