DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ranshi and ZNF793

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001013681.2 Gene:ZNF793 / 390927 HGNCID:33115 Length:406 Species:Homo sapiens


Alignment Length:323 Identity:93/323 - (28%)
Similarity:133/323 - (41%) Gaps:57/323 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQ-----------TCLQQAISFRERCLEV 72
            :||..||.|..|    |..||.:.. .|||..  .||:           |.|..:|.........
Human    85 VNIQRKRRQDML----LRPGAAISK-KTLPKE--KSCEYNKFGKISLLSTDLFSSIQSPSNWNPC 142

  Fly    73 QRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPIQSSGFKVEDILNE 137
            .:.|.|:.|...|.|.|.:.........:|             |..:|.|               
Human   143 GKNLNHNLDLIGFKRNCAKKQDECYAYGKL-------------LQRINHG--------------- 179

  Fly   138 SKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFCEECG 202
                 ..||.|.....|..:    ::.|:..|.....:.|::...:|.|..|  :.:...|.|||
Human   180 -----RRPNGEKPRGCSHCE----KAFTQNPALMYKPAVSDSLLYKRKRVPP--TEKPHVCSECG 233

  Fly   203 NHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTR 267
            .....:..||.|.:.|.|.|.:||..|...|...:.|.:|.|.|||.:||:|..|.::|:..|.|
Human   234 KAFCYKSEFIRHQRSHTGEKPYGCTDCGKAFSHKSTLIKHQRIHTGVRPFECFFCGKAFTQKSHR 298

  Fly   268 LKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSN 330
            .:|:||||.||||||.||..:|.....|..|..:||||:.:||..|.|.||:.:.|..|:|::
Human   299 TEHQRTHTGERPFVCSECGKSFGEKSYLNVHRKMHTGERPYRCRECGKSFSQKSCLNKHWRTH 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 17/68 (25%)
C2H2 Zn finger 198..218 CDD:275368 7/19 (37%)
COG5048 222..>276 CDD:227381 22/53 (42%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 10/23 (43%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 14/21 (67%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 7/17 (41%)
ZNF793NP_001013681.2 KRAB 8..68 CDD:214630
C2H2 Zn finger 190..221 CDD:275368 6/34 (18%)
COG5048 <225..385 CDD:227381 56/137 (41%)
C2H2 Zn finger 229..249 CDD:275368 7/19 (37%)
C2H2 Zn finger 257..277 CDD:275368 6/19 (32%)
C2H2 Zn finger 285..305 CDD:275368 7/19 (37%)
C2H2 Zn finger 313..333 CDD:275368 6/19 (32%)
C2H2 Zn finger 341..361 CDD:275368 8/19 (42%)
C2H2 Zn finger 369..389 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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