DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ranshi and CG15710

DIOPT Version :10

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_611122.1 Gene:CG15710 / 36832 FlyBaseID:FBgn0034120 Length:265 Species:Drosophila melanogaster


Alignment Length:155 Identity:35/155 - (22%)
Similarity:57/155 - (36%) Gaps:26/155 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 DSNRTFFCEECGNHIKDRISFILH---CKRHRG--------VKEFGCEFCEDRFCTPAELKRHIR 244
            |:.:.|.|..|.|.|:...::.:|   |:|...        |.:..|..|:..|.:...|..|..
  Fly    48 DNTQRFHCPLCSNVIRTAGAYKVHLMACQRRLARMMKDVPDVSQHQCNICKKIFSSVDALIGHRL 112

  Fly   245 KHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFR 309
            .|  ..|...|.|:.....:.|.|:: |||.......|:..:.::..:|         |..|.|.
  Fly   113 LH--GSPSMNRTCASCHVKFGTDLEY-RTHLESHLIPCESTDESYEGAY---------TITKTFN 165

  Fly   310 CDLCDKLFS---RYTHLTTHYRSNA 331
            |..|...|.   :...:|..|..:|
  Fly   166 CVFCRTEFKACFKPGQVTRRYACDA 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..76 CDD:462262
C2H2 Zn finger 198..218 CDD:275368 6/22 (27%)
COG5048 222..>276 CDD:227381 14/53 (26%)
C2H2 Zn finger 226..246 CDD:275368 5/19 (26%)
zf-H2C2_2 238..262 CDD:463886 6/23 (26%)
C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
C2H2 Zn finger 282..302 CDD:275368 2/19 (11%)
zf-H2C2_2 295..319 CDD:463886 6/26 (23%)
C2H2 Zn finger 310..328 CDD:275368 4/20 (20%)
CG15710NP_611122.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.