DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ranshi and Zfp52

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001014180.1 Gene:Zfp52 / 361487 RGDID:1359149 Length:755 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368
COG5048 222..>276 CDD:227381
C2H2 Zn finger 226..246 CDD:275368
zf-H2C2_2 238..262 CDD:290200
C2H2 Zn finger 254..274 CDD:275368
zf-H2C2_2 269..291 CDD:290200
C2H2 Zn finger 282..302 CDD:275368
zf-H2C2_2 295..319 CDD:290200
C2H2 Zn finger 310..328 CDD:275368
Zfp52NP_001014180.1 KRAB 44..84 CDD:396083
C2H2 Zn finger 219..239 CDD:275368
SFP1 <241..324 CDD:227516
C2H2 Zn finger 247..295 CDD:275368
C2H2 Zn finger 303..323 CDD:275368
COG5048 329..702 CDD:227381
C2H2 Zn finger 331..351 CDD:275368
C2H2 Zn finger 359..379 CDD:275368
C2H2 Zn finger 388..407 CDD:275368
C2H2 Zn finger 415..435 CDD:275368
C2H2 Zn finger 443..463 CDD:275370
C2H2 Zn finger 471..491 CDD:275368
C2H2 Zn finger 499..519 CDD:275368
C2H2 Zn finger 527..547 CDD:275368
C2H2 Zn finger 555..575 CDD:275368
C2H2 Zn finger 583..603 CDD:275368
C2H2 Zn finger 611..631 CDD:275368
C2H2 Zn finger 639..659 CDD:275368
C2H2 Zn finger 667..687 CDD:275368
C2H2 Zn finger 695..715 CDD:275368
zf-H2C2_2 707..730 CDD:404364
C2H2 Zn finger 723..743 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11351
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.