Sequence 1: | NP_649824.1 | Gene: | ranshi / 41041 | FlyBaseID: | FBgn0037620 | Length: | 346 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476732.1 | Gene: | sna / 34908 | FlyBaseID: | FBgn0003448 | Length: | 390 | Species: | Drosophila melanogaster |
Alignment Length: | 238 | Identity: | 65/238 - (27%) |
---|---|---|---|
Similarity: | 99/238 - (41%) | Gaps: | 48/238 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 92 SPKSVLEQEELE------LDLAEISIEVERLDDLNEGPIQSSGFKVEDILNESKINEDEPNNEDD 150
Fly 151 IDYSEMDYLIYESDT-----------EVDAKQELKSDSENPKKRRNRRNP----RDSNRTFFCEE 200
Fly 201 CGN----------HIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCR 255
Fly 256 HCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNH 298 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ranshi | NP_649824.1 | zf-AD | 5..77 | CDD:214871 | |
C2H2 Zn finger | 198..218 | CDD:275368 | 10/29 (34%) | ||
COG5048 | 222..>276 | CDD:227381 | 25/53 (47%) | ||
C2H2 Zn finger | 226..246 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 238..262 | CDD:290200 | 15/23 (65%) | ||
C2H2 Zn finger | 254..274 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 269..291 | CDD:290200 | 6/21 (29%) | ||
C2H2 Zn finger | 282..302 | CDD:275368 | 5/17 (29%) | ||
zf-H2C2_2 | 295..319 | CDD:290200 | 2/4 (50%) | ||
C2H2 Zn finger | 310..328 | CDD:275368 | |||
sna | NP_476732.1 | C2H2 Zn finger | 308..328 | CDD:275368 | 8/19 (42%) |
zf-H2C2_2 | 321..344 | CDD:290200 | 15/22 (68%) | ||
zf-C2H2 | 334..356 | CDD:278523 | 9/21 (43%) | ||
C2H2 Zn finger | 336..356 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 348..373 | CDD:290200 | 6/24 (25%) | ||
C2H2 Zn finger | 364..380 | CDD:275368 | 4/15 (27%) | ||
C2H2 Zn finger | 247..267 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 282..302 | CDD:275368 | 7/22 (32%) | ||
zf-C2H2 | 306..328 | CDD:278523 | 10/30 (33%) | ||
COG5048 | 307..>356 | CDD:227381 | 24/57 (42%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24388 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |