DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ranshi and ZNF677

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001304927.1 Gene:ZNF677 / 342926 HGNCID:28730 Length:584 Species:Homo sapiens


Alignment Length:331 Identity:80/331 - (24%)
Similarity:124/331 - (37%) Gaps:82/331 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQA-ISFRERC 69
            |..|||..|...:|.          .|.::.||.....|:     :|.  :.|.|.: ::..:| 
Human   293 CNECGKAFNQCSNLT----------RHQRVHTGEKPYQCN-----ICG--KVCSQNSNLASHQR- 339

  Fly    70 LEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPIQSSGFKVEDI 134
                   :|:.:..   ..|.|..|:.:::..|.                               
Human   340 -------MHTGEKP---YKCNECGKAFIQRSHLW------------------------------- 363

  Fly   135 LNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFCE 199
                        ..:.|...|..|...|.|         |:.:|.....:::| .....:.:.|.
Human   364 ------------GHERIHTGEKPYKCNECD---------KAFAERSSLTQHKR-IHTGEKPYICN 406

  Fly   200 ECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDY 264
            |||...|.......|...|.|.|...|..|...|...:.|..|.|.||||||:||..|.::|...
Human   407 ECGKAFKQCSHLTRHQNIHPGEKPHKCNVCGRAFIQSSSLVEHQRIHTGEKPYKCNKCDKAFIKR 471

  Fly   265 STRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRS 329
            |....|:||||.|:|:.|.||..|||....|..|..:|||||.::|..|.|.|:::.:||.|.:.
Human   472 SHLWGHQRTHTGEKPYKCTECGKAFTERSNLTQHKKIHTGEKPYKCTECGKAFTQFANLTRHQKI 536

  Fly   330 NAHRRN 335
            :..:::
Human   537 HIEKKH 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 14/71 (20%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 22/53 (42%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
zf-H2C2_2 269..291 CDD:290200 12/21 (57%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 7/17 (41%)
ZNF677NP_001304927.1 KRAB 9..59 CDD:214630
COG5048 194..540 CDD:227381 80/327 (24%)
C2H2 Zn finger 265..285 CDD:275368
C2H2 Zn finger 293..313 CDD:275368 7/29 (24%)
C2H2 Zn finger 321..341 CDD:275368 5/34 (15%)
C2H2 Zn finger 349..369 CDD:275368 4/62 (6%)
C2H2 Zn finger 377..397 CDD:275368 5/29 (17%)
C2H2 Zn finger 405..425 CDD:275368 6/19 (32%)
C2H2 Zn finger 433..453 CDD:275368 6/19 (32%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 489..509 CDD:275368 8/19 (42%)
C2H2 Zn finger 517..537 CDD:275368 7/19 (37%)
C2H2 Zn finger 545..563 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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