Sequence 1: | NP_649824.1 | Gene: | ranshi / 41041 | FlyBaseID: | FBgn0037620 | Length: | 346 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260253.1 | Gene: | prg / 34177 | FlyBaseID: | FBgn0285971 | Length: | 558 | Species: | Drosophila melanogaster |
Alignment Length: | 387 | Identity: | 103/387 - (26%) |
---|---|---|---|
Similarity: | 159/387 - (41%) | Gaps: | 78/387 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 CRTCGKRTNAERSLNIFEK-----RNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISF 65
Fly 66 RERCLEVQRELLHSQDDEDFLRICQESPK---------SVLEQEE----LELD---LAEISIEVE 114
Fly 115 RLDDLNEGPIQSSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVD----------A 169
Fly 170 KQELKSDSENPKKRRNRR----------------------NPRDSNRTFFCEECGNHIKDRISFI 212
Fly 213 LHCKR-HRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTN 276
Fly 277 ERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRRNMQK 338 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ranshi | NP_649824.1 | zf-AD | 5..77 | CDD:214871 | 19/75 (25%) |
C2H2 Zn finger | 198..218 | CDD:275368 | 6/20 (30%) | ||
COG5048 | 222..>276 | CDD:227381 | 21/53 (40%) | ||
C2H2 Zn finger | 226..246 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 238..262 | CDD:290200 | 12/23 (52%) | ||
C2H2 Zn finger | 254..274 | CDD:275368 | 9/19 (47%) | ||
zf-H2C2_2 | 269..291 | CDD:290200 | 10/21 (48%) | ||
C2H2 Zn finger | 282..302 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 295..319 | CDD:290200 | 8/23 (35%) | ||
C2H2 Zn finger | 310..328 | CDD:275368 | 7/17 (41%) | ||
prg | NP_001260253.1 | zf-AD | 16..94 | CDD:285071 | 20/82 (24%) |
COG5048 | <212..340 | CDD:227381 | 37/127 (29%) | ||
C2H2 Zn finger | 239..260 | CDD:275368 | 6/20 (30%) | ||
C2H2 Zn finger | 268..288 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 280..305 | CDD:290200 | 13/24 (54%) | ||
zf-C2H2 | 294..316 | CDD:278523 | 10/21 (48%) | ||
C2H2 Zn finger | 296..316 | CDD:275368 | 9/19 (47%) | ||
zf-H2C2_2 | 308..331 | CDD:290200 | 9/22 (41%) | ||
C2H2 Zn finger | 324..344 | CDD:275368 | 5/19 (26%) | ||
C2H2 Zn finger | 352..372 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 416..436 | CDD:275368 | |||
C2H2 Zn finger | 443..464 | CDD:275368 | |||
C2H2 Zn finger | 470..490 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24388 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |