DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment ranshi and Cf2

DIOPT Version :9

Sequence 1:	NP_649824.1	Gene:	ranshi / 41041	FlyBaseID:	FBgn0037620	Length:	346	Species:	Drosophila melanogaster
Sequence 2:	NP_001350854.1	Gene:	Cf2 / 33692	FlyBaseID:	FBgn0000286	Length:	537	Species:	Drosophila melanogaster

Alignment Length:	284	Identity:	72/284 - (25%)
Similarity:	120/284 - (42%)	Gaps:	63/284 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    60 QQAISFRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLA--EISIEVERL-----D 117
            ||....:::..:.|:|||..|..|    :.:::.:..:...:.:.|||  :::::|..|     .
  Fly   238 QQQHQQQQQQQQQQQELLEQQQRE----MQEQAQQQQVHHHQQDQDLAGDQVALKVPPLTVKLNK 298

  Fly   118 DLNEGPIQSSGFKVEDILNESKINEDEP---NNEDDIDYSEMDYLIYESDTEVDAKQELKSDSEN 179
            :.|.|.|.|         :...|.::||   ::..|:..|...|.|       .|...:.:.:.:
  Fly   299 NANGGAIVS---------HPQVIIKEEPLSLSDSGDVVNSVPVYAI-------QANPGVPAPASS 347

  Fly   180 PKKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIR 244
            ......:..|.|                    :.|..||:      |..|...|.||..|..|.:
  Fly   348 GVLVGTQTVPAD--------------------LAHKIRHK------CPDCPKTFKTPGTLAMHRK 386

  Fly   245 KHTG-------EKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVH 302
            .|||       |:|:.|.:|.:||:..:|..:|.|.||.|:||.|..|..:|:....|..|:..|
  Fly   387 IHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTH 451

  Fly   303 TGEKAFRCDLCDKLFSRYTHLTTH 326
            ||||.:.|..|||.|::.:.||.|
  Fly   452 TGEKPYTCPYCDKRFTQRSALTVH 475

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ranshi	NP_649824.1	zf-AD	5..77	CDD:214871	4/16 (25%)
		C2H2 Zn finger	198..218	CDD:275368	1/19 (5%)
		COG5048	222..>276	CDD:227381	20/60 (33%)
		C2H2 Zn finger	226..246	CDD:275368	7/19 (37%)
		zf-H2C2_2	238..262	CDD:290200	10/30 (33%)
		C2H2 Zn finger	254..274	CDD:275368	7/19 (37%)
		zf-H2C2_2	269..291	CDD:290200	10/21 (48%)
		C2H2 Zn finger	282..302	CDD:275368	5/19 (26%)
		zf-H2C2_2	295..319	CDD:290200	12/23 (52%)
		C2H2 Zn finger	310..328	CDD:275368	8/17 (47%)
Cf2	NP_001350854.1	COG5048	<366..>473	CDD:227381	40/112 (36%)
		C2H2 Zn finger	368..388	CDD:275368	7/19 (37%)
		C2H2 Zn finger	403..423	CDD:275368	7/19 (37%)
		C2H2 Zn finger	431..451	CDD:275368	5/19 (26%)
		zf-H2C2_2	443..468	CDD:316026	12/24 (50%)
		C2H2 Zn finger	459..480	CDD:275368	8/17 (47%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24388
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100