DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and LOC3291405

DIOPT Version :10

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_552587.4 Gene:LOC3291405 / 3291405 VectorBaseID:AGAMI1_004399 Length:388 Species:Anopheles gambiae


Alignment Length:418 Identity:102/418 - (24%)
Similarity:155/418 - (37%) Gaps:122/418 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VCRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTL-------------PNR-----L 51
            |||.|            ...|:.|.||         ||..|.|             |:.     |
Mosquito     6 VCRLC------------LTDRDPTFLE---------LKQDSDLIDTIFNVLSFEPMPHSIDTIVL 49

  Fly    52 CASCQTCLQQAISFRERCL---EVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEV 113
            |..||..|.|...|||.|:   |:.||.|.|          :||..:|..:|:....|..:.||.
Mosquito    50 CPDCQLFLTQVEQFREGCIHNDEIFRERLQS----------EESMTTVYVKEDNVDGLRVVIIEE 104

  Fly   114 ERLDDLNEGPIQSSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDS- 177
            :....|  |.|..:|      |.:..:.:..|:.|.::.......:..|.:..|...::.|:.. 
Mosquito   105 DEAQQL--GLIDEAG------LEKEVVQQSWPDEEQEVKEDVAPSIPEEKNESVRQTRQRKAKQV 161

  Fly   178 ----ENPKKRRNRRN--------------PRDSNRTF---------------------------- 196
                |.|||.:|:..              |....|.|                            
Mosquito   162 APKREPPKKPQNKPELVVKQEDSPAPTAVPTKPKRKFVAATSNRYLPCVRCGKMLRRSNMVKHLE 226

  Fly   197 ---------FCEECGNHIKDRISFILHCKRHRGV-KEFGCEFCEDRFCTPAELKRHI-RKHTGEK 250
                     ||..||...:|.....:|...|... :::.||.|...:..|..|:.|| ..|:.|.
Mosquito   227 THDPKPPQLFCSYCGKQYRDPNLLKVHINSHHTFERKYECEECGKVYYRPNSLREHILANHSKEL 291

  Fly   251 PFKCRHCSRSFSDYSTRLKHERT-HTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCD 314
            .::|:||...||::|.|..|..| |:..||:.|:.|:.||........|:..|||||.|.||:|.
Mosquito   292 RYECKHCGMKFSNFSKRTYHYATAHSEARPYSCQYCDKAFKLRSDWTLHVRTHTGEKPFSCDICG 356

  Fly   315 KLFSRYTHLTTH---YRSNAHRRNMQKA 339
            |.|::..::|.|   :|:...|:.:::|
Mosquito   357 KRFNKSYNVTIHKKSHRNEEARKALKEA 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..76 CDD:462262 25/91 (27%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 19/55 (35%)
C2H2 Zn finger 226..246 CDD:275368 7/20 (35%)
zf-H2C2_2 238..262 CDD:463886 8/24 (33%)
C2H2 Zn finger 254..274 CDD:275368 9/20 (45%)
C2H2 Zn finger 282..302 CDD:275368 5/19 (26%)
zf-H2C2_2 295..319 CDD:463886 12/23 (52%)
C2H2 Zn finger 310..328 CDD:275368 7/20 (35%)
LOC3291405XP_552587.4 None

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