DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and AgaP_AGAP003364

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_558380.4 Gene:AgaP_AGAP003364 / 3290820 VectorBaseID:AGAP003364 Length:618 Species:Anopheles gambiae


Alignment Length:458 Identity:122/458 - (26%)
Similarity:187/458 - (40%) Gaps:134/458 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VCRTCGKRTNAERSLNIFEKRNQTTL-EHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISFRER 68
            :||||.:::|..||:...::..|.|. |.:.......:....:||||:|..|...|..|..||..
Mosquito    24 ICRTCLQQSNDTRSIFDLDQTTQLTYSEKVMQCVDVEIYPHDSLPNRICRQCVDDLDVACRFRAN 88

  Fly    69 CL----------------EVQRELL---------HSQ-DDEDFLRICQESPKSVLEQEELELDLA 107
            |.                |.|.:::         ||. ||.|.:.|..:|......:....||:.
Mosquito    89 CTSSSVVLQTYLSYNGLEEKQLDMMLQPTLAQSVHSDPDDGDEIAIHLDSGVMYTYKPPSGLDVK 153

  Fly   108 EISIEVE---------RLDDLN-------EGPIQS---SGFKVEDILNES-------KINEDEPN 146
            .:....|         :::.||       |.|:.|   :...||.:.:.|       .:...|..
Mosquito   154 LVHHSAEDVIFNSGNMKMESLNGNANVPVEEPVNSVAETMAMVEPMHHSSLDGNITLAMESAEAT 218

  Fly   147 NEDDIDY-------SEMDYLIYE-----------------------------SDTEVDAKQE--- 172
            |.|.|:|       .|.|..:.|                             ::|..:.||.   
Mosquito   219 NNDHIEYMFEVVNEPETDDSMLEPAVDVMHVQNTATADRTLRKTTNSMTPDSTNTHSNGKQYSFA 283

  Fly   173 --------------LKSDSENPKK-----------------------RRNRRNPRDSNRTFFCEE 200
                          .||.:.|..|                       :||...|:.|   ..|:.
Mosquito   284 NRTNAASVKTLQTIRKSHTPNETKPTIEAVTTQPAADGSGVETVIRVKRNLSAPKPS---LVCKL 345

  Fly   201 CGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYS 265
            |....|.:.:...|.:||||.:...|::||..|..|.||:||:|.|||:||:||::|.|::||:.
Mosquito   346 CNVTYKHKHALETHMRRHRGDRPHKCDYCEKSFVVPFELQRHMRIHTGQKPYKCQYCERAYSDFG 410

  Fly   266 TRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSN 330
            ::.|||||||.|||:.|..|:..|:.|::|.:|:|||||.|.:.|.:|.|.|::..||.|||  |
Mosquito   411 SKTKHERTHTGERPYACHYCDKTFSYSHVLNSHLLVHTGVKKYCCSICGKRFTKSHHLKTHY--N 473

  Fly   331 AHR 333
            .|:
Mosquito   474 THQ 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 23/88 (26%)
C2H2 Zn finger 198..218 CDD:275368 4/19 (21%)
COG5048 222..>276 CDD:227381 27/53 (51%)
C2H2 Zn finger 226..246 CDD:275368 10/19 (53%)
zf-H2C2_2 238..262 CDD:290200 14/23 (61%)
C2H2 Zn finger 254..274 CDD:275368 9/19 (47%)
zf-H2C2_2 269..291 CDD:290200 13/21 (62%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 12/23 (52%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
AgaP_AGAP003364XP_558380.4 zf-AD 24..98 CDD:214871 21/73 (29%)
COG5048 <265..480 CDD:227381 73/217 (34%)
C2H2 Zn finger 343..363 CDD:275368 4/19 (21%)
zf-H2C2_2 355..379 CDD:290200 8/23 (35%)
C2H2 Zn finger 371..391 CDD:275368 10/19 (53%)
zf-H2C2_2 383..407 CDD:290200 14/23 (61%)
C2H2 Zn finger 399..419 CDD:275368 9/19 (47%)
zf-H2C2_2 414..436 CDD:290200 13/21 (62%)
C2H2 Zn finger 427..447 CDD:275368 7/19 (37%)
zf-H2C2_2 440..463 CDD:290200 11/22 (50%)
zf-C2H2 453..475 CDD:278523 10/23 (43%)
C2H2 Zn finger 455..475 CDD:275368 10/21 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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