Protein Alignment ranshi and Zfp189

DIOPT Version :9

• Sequence 1: NP_649824.1
• Gene: ranshi / 41041
• FlyBaseID: FBgn0037620
• Length: 346
• Species: Drosophila melanogaster
• Sequence 2: NP_001101400.1
• Gene: Zfp189 / 313219
• RGDID: 1306510
• Length: 608
• Species: Rattus norvegicus
• Alignment Length: 272
• Identity: 90/272 - (33%)
• Similarity: 129/272 - (47%)
• Gaps: 43/272 - (15%)

  Fly    92 SPKSVLEQEEL--ELDLAEISIEVERLDDLNEGPIQSSGFKVE-DILNESKINED-EPNNEDDID 152
            ||...||.:|.  .||.|..|:..:.:.|       |.|..|. |:||.   ||| ||..:::|:
  Rat     3 SPSPPLESKEEWGYLDAAPRSLYKDVVMD-------SYGKLVSLDVLNR---NEDEEPTVKEEIE 57

  Fly   153 -------------YSEMDYLIYESDT-----EVDAKQ-----ELKSDS--ENPKKRRN----RRN 188
                         .||:|.....|:|     .:|.::     |:..||  |..|..|.    |:.
  Rat    58 KDIEPQGIIVTRIKSELDQDPMGSETFELVGRLDKQRGIFLWEIPRDSLTEEQKMFRGHTNVRKR 122

  Fly   189 PRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFK 253
            |....:...|||||.....:..||.|.:.|.|.|.|.|..|...|...:.:..|.|.||||:|::
  Rat   123 PNSEEKCHKCEECGKRFVRKAHFIQHQRVHTGEKPFQCNECGKSFSRSSFVIEHQRIHTGERPYE 187

  Fly   254 CRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFS 318
            |.:|.::||..||.::|:|.||.|||:.|.:|..:|:....|..|..:|||||..:|..|.|.||
  Rat   188 CNYCGKTFSVSSTLIRHQRIHTGERPYQCNQCKQSFSQRRSLVKHQRIHTGEKPHKCSDCGKAFS 252

  Fly   319 RYTHLTTHYRSN 330
            ..:||..|.|::
  Rat   253 WKSHLIEHQRTH 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ranshi	NP_649824.1	zf-AD	5..77	CDD:214871
		C2H2 Zn finger	198..218	CDD:275368	8/19 (42%)
		COG5048	222..>276	CDD:227381	21/53 (40%)
		C2H2 Zn finger	226..246	CDD:275368	5/19 (26%)
		zf-H2C2_2	238..262	CDD:290200	9/23 (39%)
		C2H2 Zn finger	254..274	CDD:275368	8/19 (42%)
		zf-H2C2_2	269..291	CDD:290200	10/21 (48%)
		C2H2 Zn finger	282..302	CDD:275368	5/19 (26%)
		zf-H2C2_2	295..319	CDD:290200	11/23 (48%)
		C2H2 Zn finger	310..328	CDD:275368	8/17 (47%)
Zfp189	NP_001101400.1	KRAB_A-box	<10..39	CDD:143639	9/35 (26%)
		COG5048	116..506	CDD:227381	56/149 (38%)
		C2H2 Zn finger	132..152	CDD:275368	8/19 (42%)
		zf-H2C2_2	144..169	CDD:290200	10/24 (42%)
		C2H2 Zn finger	160..180	CDD:275368	5/19 (26%)
		zf-H2C2_2	175..196	CDD:290200	9/20 (45%)
		C2H2 Zn finger	188..208	CDD:275368	8/19 (42%)
		zf-H2C2_2	201..225	CDD:290200	10/23 (43%)
		C2H2 Zn finger	216..236	CDD:275368	5/19 (26%)
		zf-H2C2_2	228..252	CDD:290200	10/23 (43%)
		C2H2 Zn finger	244..264	CDD:275368	9/19 (47%)
		zf-H2C2_2	256..281	CDD:290200	4/9 (44%)
		C2H2 Zn finger	272..292	CDD:275368
		zf-H2C2_2	285..307	CDD:290200
		C2H2 Zn finger	300..320	CDD:275368
		zf-H2C2_2	312..337	CDD:290200
		C2H2 Zn finger	328..348	CDD:275368
		zf-H2C2_2	341..365	CDD:290200
		C2H2 Zn finger	356..376	CDD:275368
		zf-H2C2_2	368..393	CDD:290200
		C2H2 Zn finger	384..404	CDD:275368
		C2H2 Zn finger	440..460	CDD:275368
		zf-H2C2_2	452..477	CDD:290200
		C2H2 Zn finger	468..488	CDD:275368
		zf-H2C2_2	481..505	CDD:290200
		C2H2 Zn finger	496..516	CDD:275368
		zf-H2C2_2	508..533	CDD:290200
		C2H2 Zn finger	524..544	CDD:275368
		zf-H2C2_2	537..561	CDD:290200
		C2H2 Zn finger	552..572	CDD:275368
		C2H2 Zn finger	583..603	CDD:275368

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000