DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF454

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001171560.1 Gene:ZNF454 / 285676 HGNCID:21200 Length:522 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368
COG5048 222..>276 CDD:227381
C2H2 Zn finger 226..246 CDD:275368
zf-H2C2_2 238..262 CDD:290200
C2H2 Zn finger 254..274 CDD:275368
zf-H2C2_2 269..291 CDD:290200
C2H2 Zn finger 282..302 CDD:275368
zf-H2C2_2 295..319 CDD:290200
C2H2 Zn finger 310..328 CDD:275368
ZNF454NP_001171560.1 KRAB 14..73 CDD:214630
KRAB 14..53 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..170
zf-C2H2 178..200 CDD:278523
C2H2 Zn finger 180..200 CDD:275368
COG5048 186..522 CDD:227381
C2H2 Zn finger 218..238 CDD:275368
zf-H2C2_2 230..254 CDD:290200
C2H2 Zn finger 246..266 CDD:275368
zf-H2C2_2 258..283 CDD:290200
C2H2 Zn finger 274..294 CDD:275368
zf-H2C2_2 286..311 CDD:290200
C2H2 Zn finger 302..322 CDD:275368
zf-H2C2_2 314..339 CDD:290200
C2H2 Zn finger 330..350 CDD:275368
zf-H2C2_2 342..365 CDD:290200
C2H2 Zn finger 358..378 CDD:275368
zf-H2C2_2 370..393 CDD:290200
C2H2 Zn finger 386..406 CDD:275368
zf-H2C2_2 398..421 CDD:290200
C2H2 Zn finger 414..434 CDD:275368
zf-H2C2_2 426..450 CDD:290200
C2H2 Zn finger 442..462 CDD:275368
zf-H2C2_2 454..479 CDD:290200
C2H2 Zn finger 470..490 CDD:275368
zf-H2C2_2 482..507 CDD:290200
C2H2 Zn finger 498..518 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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